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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ptr-17
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIISKIRAAP LEQPWANIVA KYCLFVAKYP WPFIIIPLII TICLSMGIIL NFKIVRGVNY  60
   61 LYAPLNATWK TEEAVFGENW AKDDDHFYPG KDILRRQGIY LIVNAKDGGN VLRQEYAQDF 120
  121 LKILDWILNV KLLSSAGRIF TYKDVCLHFQ NDCFSNPHAK LLANIYSKNH QNSMFNITYP 180
  181 IYRSTYATEP IDISKVLGNV SLDYDGHVEN ASAWLILYQL KNEKWQLSRD FEDGLAEKIQ 240
  241 SGEAPSELLN LYYFHSATFD QELEKENRRL TPKFSITFSV LIIFAIMTTF TIKFMKFKTE 300
  301 NGINQYPVID WVLSKPLLGI CGVLVTMCAI ISSTGLLMLF NVTFVDMCTV MPFLSLTIGI 360
  361 DDTFLMLAAW HETDRNLPYE KRIEKAMRHA AVSISITSLT DALAFLIGSI APLPAVIYFC 420
  421 YYSSAAILFI FLYVLTMFVA VLALQGRREE DLKHSVTGMK TIDLDSDYET ASTRQLLLKM 480
  481 GSRVSVKADE ENNNNNNEKS IENIQKIDNR MWYQRFFEDQ YAPFISNSKI SILSFLIYLA 540
  541 YLAAAFYGVK HLKIGFDFVV TVVLTIKYKV LQLINIVQED SASRVFLEVR EQLFPEDTKL 600
  601 MDIAVMNSPN FSNPEERFNF MEVLSEFEST WCSEGRESTQ FWFFEMQKYL SNLGFGGDLT 660
  661 KTMNSERKLS QSKKTFLMSH EKFGYDVLSD KQFRLSTRLK NVETDEEMFN CARTMRKLSQ 720
  721 KHANYSIITY SPLWNIADEY DIMWPQTMQD IYISIAVMVP VALLFIPQPL CSVIIGEFCR 780
  781 IRSICSLRCL CSQTSQA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle