YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE41326
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	36	0.89
Transmembrane Helix	37	54	0.69
Non-Cytoplasmic	55	76	0.66
Transmembrane Helix	77	97	0.71
Cytoplasmic	98	104	0.67
Transmembrane Helix	105	123	0.88
Non-Cytoplasmic	124	127	0.77
Transmembrane Helix	128	149	0.90
Cytoplasmic	150	161	0.90
Transmembrane Helix	162	182	0.91
Non-Cytoplasmic	183	194	0.83
Transmembrane Helix	195	214	0.95
Cytoplasmic	215	237	0.93
Transmembrane Helix	238	262	0.86
Non-Cytoplasmic	263	273	0.92
Transmembrane Helix	274	295	0.83
Cytoplasmic	296	301	0.78
Transmembrane Helix	302	322	0.92
Non-Cytoplasmic	323	331	0.69
Transmembrane Helix	332	353	0.92
Cytoplasmic	354	361	0.69
Transmembrane Helix	362	382	0.90
Non-Cytoplasmic	383	396	0.80
Transmembrane Helix	397	419	0.92
Cytoplasmic	420	450	0.94

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIERATRQN VRRGRPPGTR RAVVFDDTPQ PSEWRNIWVA ICGFYILFAE TGVRQVMNGF  60
   61 VEPVIKTYNC TKDQADTAVL VVPMASSLIL GPFCSIFYQR SGARISIIAG SFLTGGSFVV 120
  121 GPFCKNIYLL MLATFGMGIG CGLMRNSIIS IQCEYFKKKR NTVMAAISIG PGLGIFILPR 180
  181 TLKFIMVKYN SWGPAWWFLS LFYIVSAIMG LFITKPPSEQ TSTFSFGSAF KVCKKLEFDL 240
  241 HLIACFFASS VMFIYIANIL ILMESENIED KEILYGYQGL TSIAGKFVLT FVMSLNKVHN 300
  301 GIIMILSYVI AQLSLSAAAF CYKFWQFRLQ NAFAGIGIGL YQACLAPFLV ALVGPSQLAY 360
  361 ALGFTNLING VSIISGVWIS GFASKGTTGD HARSAFFVSI WLGLAAIVMS IATSSVLMAR 420
  421 EKHKRKPSMK QMKHSSELNA LTNITSVENS