YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: haf-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHCLCVLRST LCCQMPTSTY RMLLQTKAVP VQIIKRDLTA KVKNQKLNQN IRRVDRRNAA  60
   61 YLLRHTTWKD LVELYEIAKP FRKWIFLGTS FMVVSSGIFL IIPRILGKLI DQFDSNTGVQ 120
  121 KAEEVFTMKI AKYFKEQPMS LVGLLAIGAL ATAAKVYCLQ IAGVNIVGSL RKMVYSSIIR 180
  181 QDMTFFDKNM VGEIGSRHAA DTVIVGYSVS SSLRAGVRAV LVGVGSIGMM LMTSLELSTV 240
  241 SFLTAPIVMG IFKMFGRVQQ QCTWQLQEVA ADVNQTAIER MANMKTIRML SAEQQSIDEY 300
  301 CKKGELVLDI SKTEALAKGS LIGSFQFTGY SAFSSILFYG SHLINTGHIT YGELSSFCLY 360
  361 AVLAAASLSN ISGFYNEVMK GLGASSRLLE LKNAQPIMNL NSGIKKTDIT TSIQFENVSF 420
  421 AYAGRKKTLE NISFDIPRGK ITAVIGPSGS GKSSIANLML RLYDPADGRV TVDGVDLRDL 480
  481 NATTWRHAIG TVGQEPVLFT CSIRENILMG TEHPEKVSQY ELEEAAQLAN ALDFIQGFEN 540
  541 GFETMVGEHG CKLSGGQKQR IAIARALISK PKIMILDEAT SALDATSDYL IRMTLDNLLK 600
  601 NHNLTVLVIA HRLATMQQAD QVVYVNRGRI EGQGTFDEMM KIQNSIVEQE ARRRGIPMNE 660
  661 QMSRVNTPVA RGFSLKF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle