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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gei-13
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDCSSTLAA LLPTADFTAS LGNSDDHVDV SSFTTTSEST SPPYSSSEHH SPTDQRTETP  60
   61 TSDSGNASFS PENVATSFES SDRDASPDNL STSSAHLNDL QEKGVVVDEE LQRQLLRFHQ 120
  121 DFKESLMENN QNTINMMSAA FNQQLFKQTL ANLNTVTPQL PVNIPTGLPM PASPCTTAAS 180
  181 APSVESTPTK RKRQRRNPVW PYFDVIDGTA RCKQCLYSTK SVFSTNLKVH LRSHHRPDYE 240
  241 KVIMAEDALN LNALLLSGNT SKLFNVDANR KRMPPMTSSI LMTINKLANQ QQNGEENPLN 300
  301 AVLRQTIANN GLQQHLQNVQ TQLQAAQAAV QKQQQQQQQQ QIQQQQQQQQ QGAIPQFALN 360
  361 AANLAALNQL ARNQMQPTPP PVPQVSQDNI INTLNFPAHI KQEIMNAPHG TDANGVPQPK 420
  421 RRRLRRHPVW VYFKDLEDRM VGCTNCEFRT GSAFSTNLKM HLKAHHKDDY EKVLQLEEEM 480
  481 RLEEGCFGPG NKFKTELIDY IRGGGNVTTP PTPNSSSFPS TPKTPQLVQQ IISQSFARSQ 540
  541 SPNVIQNGEI KIKKECEDDM FSGLSSTDKL AALVGIAGQE VKKEEAMPAN FEEFRQRLLA 600
  601 NSSLSSFLGQ STAQPIAVDL NGSVIASETK SPCSSNEDDR KQERDKALAR LWADNETLLT 660
  661 NTHFREFVHC LAPEYEIPDV DILATSLVDQ Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle