YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE41940
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRMAERLAE NFIPEANQRN ENEPAYSRYK RVGQNRSRLN SRASLGSSMG RRITLIETDS  60
   61 GVIEVESDKQ FLDAFKDANM DAVHHLNAAS PVTRGLWCMI IIAFVILVLV QCYSQIKLYI 120
  121 SEPVATNIEA EYPSKISFPT VAICNNNQFR LTYLTGGRIM NRRSKSISGS LLSTGHDVES 180
  181 VFDTVLRKSW DMDAVKFLRS AAHWKSRMIL GCTWPNGTSC KLSDFKAVWT TTGLCWAINT 240
  241 DPHNPYEVTG SGEGHGLRLL LNVESYERVD ACTKHFRTKT LPGLKILIYN QTDIPDSSMN 300
  301 GVNVPSGYSM DIPFKMQHRS KLTGVHCIEE NDEQIEASTD FNNPENIRTC TLRRYMTEVE 360
  361 NSCHCTLRRA YTSNSTDVKM KACNVDQYFG CAQKAMQRIR EEGTASTCLP PCKSIDYTAW 420
  421 QDMNRLPQNL MPALIEEQEE DDEDDVEQEE LDENVSFSTV SGGETFSCED SAYLDDKQVM 480
  481 RIKRDAHRAY EMQARHQEDI FLRSRRLIAR LRNAINSIER YKWGWHYDTF SGVADRLSNL 540
  541 TCFSNFSERH RDIISILESR PITSEEKKAN QMFFLLDETA FNRNATRYMS VGDLKSRYGD 600
  601 KVDDVAEEIA VILRIMEKLW HVFMPDSYIR TMTGDFSRMD RIIELMNQYE LNKLQRRAWA 660
  661 EKMQSRQMKH FFEDDFYESY YQPLIKDLDT TLVKQIDEVE ADWPKVEYYL QRGSAGKTGA 720
  721 IMFFGDGNKD NRQKFEKLIV EMHECASGKM RKEAGKMLSS FKKSYRELQA AYGKLFKEEL 780
  781 PDYLENFQFG NKFVGDNFAM VNIFLHRMNL EVWSQDRTYG FWSLACDIGG ALGLFLGASL 840
  841 LTIIEIVYLC IQYGLCGKRA RNMKCIPMDA LTRQMKKVAT CSCCKKPIEK SREPIYKKKS 900
  901 QSYQRRFTAD DEDQGDKFRS RASSEESKRR KNIWAQMNDP SGNSTLTPSE IKNFLDQVQR 960
  961 NSQPPSYHDD HHPEDHYYYN DPNYLTISPP SDRPEDNREG STSGYYSSPR APPQANPRDE1020
 1021 SPIPDTEPIS VSEFSDALAP PLFKTPPRER RTRKEQKIDE EDDDKHSYV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle