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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: abts-3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTESSPEPLD DLYEERIRRP VVRWQSMKED GKDSNGLRRT ETLPEMRPGR RGGRRRLRPR  60
   61 NNNDEDGDSG SLQHSFLRVP VGLSGRSSPS VASMGSEPES CIDDTRYMTD DDDVIDEYDN 120
  121 VTLMYAKHEK IPMKDFGSEI RATMDIDHLL NKAVLLLDLQ ETSLEEIFAK IIHEMDIQEP 180
  181 EFTSEQVRSV LFTQDAGNQF HILSRTVQSI CTTGSVGGSF DYDQTWICAL CMLNTVQHRH 240
  241 VAIARLSHPT NLGRTMQDLR FIIIVIAPSR AKGTKTALET TRTFATLFAD MEIRQRLVMA 300
  301 QSVEQFRSTL LSAAKELAMD QNQWRERKSS IHLSHAKEQI FGPEAWYPFR GLVEEFKRRL 360
  361 AIYPSDYLDG IRGHKTVQKL FSTVVFLYFA CLLPAIAFGV LNDDNTKGAI NVRKVIIAQA 420
  421 IGGIFFSLFG GQPMIILLTT VPLAIYIKVI FKISQELGYD FLAMYACVGL FCQMFLILYS 480
  481 ATELCSLMKF ATRSAEEMFS LFIAIAFTVE SIRAIHNSFK KNYNDCDTSA ISMKAARTAL 540
  541 NAFKNGSNAD SIVGNITSSM SIGDTGSLCR RDTSILYMLL MFGTLWLGLF LYNFRKTPYL 600
  601 TRSRREWLAD YALPASVLIM SFTGSYAFSD IEKDRFNLRF EFPLIQMADV TSLPPSGYFV 660
  661 CLLLGFSLSF LFFIDQNITS AIVNNNQNKL KKGTSHNLDL FVVALLNMFL SVFGLPWMHG 720
  721 ALPHSPLHLR ALADVEERVS QGHVHEVIMN VRETRLASLI AHVMILVSMF FLIPYPLQLI 780
  781 PTSVLHGLFL YMALTSLSGN EMFERLLLLI TEQQAYPPTH YIRKVPQRKV HLFTACQLLQ 840
  841 LIILCAFGFS PYPFIEMVFP IVCFFFLPIR HTLIPRLIDY KYLDALDGRH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle