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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ptr-12
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAESHIQTK SASHEAVKTT RLVRGISWFF EKWSHFVADH AVALIVICVV LTLIGTFKVA  60
   61 TTPNDNDITG YTPYGARARD EFDVMTDFFA HNGNGIAMFV LILPTRHESV LHPDVLREAL 120
  121 RLEDILSTNF SMLSADGKPE NYQEFCTNFC QINEPFVQFA RSYLTELDNS KNGTDLSERI 180
  181 SLNYPITSIY SRKMSIQPNF FGIEMMNETK KSITNIRSSK LIALQLRSER KEGWNSNGIK 240
  241 DFEMSITNYL EKEFESPEIR VLTLSTSYVE AEVVRAGMSL LPFLIVGFVI MAIVSSVTTF 300
  301 FSAVYMQQVS IHKFSLAIAA CICPFMACGT ALGALFFCGV RFGSILCVTP FLVLAIGVDD 360
  361 AYLMIHSWQR VTAERRKHPV ANDSPGSRLS EVLVDTGPAI LISALTNIFA DVAGCFTSSP 420
  421 EISLLGYGNM ACIFCDFLYQ ITFYSAIMTL TGYFEMKDEE QKRHIKKIAC GADSDDSSCT 480
  481 SSSVESFDVI VKRRVTSFLE NYISLITNAF FQIFVVLVWI AFLVVSIYGI TIMNINLSPR 540
  541 KLFMEDSSLR EMDDLRVKYV IPNFYLANVF VRKPGDLTDG ARLQRLNQFV EEMEHLNGSW 600
  601 GSLGTNYFVR DFVNFQAAMV EEEEAEGGEE EASIVKRGGI DVNNLPMFLE WPEYLFWKGF 660
  661 VQFHSAENRT VLDRFFITFA IHGTNLQSWP ARGDALREWR NVVDKYSAEF GLSVFSDDGI 720
  721 YVDLIENMPT DAWQSAVATL ACMAFICFVF MYDVPTVMVA TSIIASIMTG ILGILSLTGT 780
  781 DLDPIVMSAL IISIGFSVDI PAHISYHYHT SPSDNGIRHR LHKTLSSVGF PALQATVSTS 840
  841 LCVLSLKFSS IYMSCAFVKT MITCMILCVF HALVLLPCLF AIFHRIHSLF RVPKTSPIES 900
  901 K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle