YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NOXC_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKQKNISIK KFANPLSFPH EFRTNLHKST FLDASLLELP NISVDKTKNE NNFSITDKIL  60
   61 MESLKENEFK IREFIKNQES GNRVLMIDKN SLKELFNIND NQALDLIFNQ YVQSTRPNLI 120
  121 RKSSNSSLNI DLKKEIKKKT KKSRKSFSRN SKLNNNDSKI DDKNDNYIDK INDINNFNSD 180
  181 IEEIFKKKKE IENTLKIPIG GNSFPIPVEF NNNNNNNNNN NNNNNNNYNN NIDNNNNNNN 240
  241 NNNNNNINNC NNNNINNDNN NNNNNDNDNN NINTVDNHDD DIINNSNNFN KNEYPSSNIS 300
  301 PISPKSSISS FPTNLNNSIN NTGSMVSDSL SSCRNSISSS SIDSSVASIP ITIQSIDFED 360
  361 KNIKSDQFKI ISKSNIENTI ETNPIPPFNQ TNNQCEVQLQ SHSLPTILKQ PHIYKSKSFS 420
  421 SSINSNSKIK KIKKSRSFEI ESKINLFDVI NHIYLNLSKV GSEEQKITSV FKLYDIYDKG 480
  481 FISRDDLKEV LNYRTKQNGL KFQDFTMESL IDHIFQQFDK NMDGYIDFEE FKSELTINNE 540
  541 NKVKEKEENT NYNFKEENIG IYTEKESFHS LKRYLKIEGS KLFFISLFFI INSILVITSF 600
  601 LNVHANNKRA IELFGPGVYI TRIAAQLIEF NAAIILMTMC KQLFTMIRNT KFKFLFPVDK 660
  661 YMTFHKLIGY TLIIASFLHT IGWIVGMAVA TGKPDNIFYD CLAPHFKFRP TVWEMIFNSL 720
  721 PGVTGFIMIS FLIIMAILSL KIIRKSNFEL FYYSHHLFIG FYVLLILHGT MGWIRPPTFW 780
  781 KWFIVPGFFY TVDRSFRLFK RTHRVEVLDY CLKNERVINL TFSKPPSFDY KPGQYLLINV 840
  841 PHISKLQWHP FTMTSSPLED KIYVHIRVTG NWTKKLFRWL SIKKQLQQQQ QLYNNIKQQN 900
  901 VLPDGSNFII NNNNNIDQID LEIGLKPFRI NIDGPFGSSS QYALKQKQVI LVGAGIGVSP 960
  961 MASLLKDISL KKQRLQLLNQ GDQIALEQSK NEITTKFGLG NLEKVHFFWL NRDQHSFQWF1020
 1021 EDLLIDISTN GNSNLPKISI NTFNTRVFPK NDVRVFMLWN GLDKLFKAQG LDPTTNLPFK1080
 1081 THWGRPNWDT IFQYYSKKYS GESISVFCCG PSQLSKELYE KCRYYTCLKT GGTKFYFHKE1140
 1141 NF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle