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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PAP_DICDI
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKNGGPPVA NITTSSTTIT STTTTQAKSQ LPSSLSVNNL HTTQGSTDQP TILGVTEPIS  60
   61 TAPPSSIDFK LSTELENTLI SFNLFESPEE SRKREEILGK LNQIVREWAK QVSLKKGYPE 120
  121 QTASEVVAKI FTFGSYRLGV HGPGSDIDTL CVGPKHIMRS DFFDDLSDIL KVHPEITEFT 180
  181 TVKDAFVPVI TMVFSGIPID LIYAKLALTA IPEELNDLID ESFLKNIDEK SILSLNGCRV 240
  241 TDQILKLVPN IPNFRMALRC IKLWAIRRGI YSNILGFLGG VSWALLTARI CQLYPNSAPS 300
  301 TIIHRFFKVY EIWKWPAPIL LCHIQEGGIL GPKVWNPKRD KAHLMPIITP AYPSMNSTYN 360
  361 VSKSTLQLMK SEFVRGAEIT RKIETGECTW KNLLEKCDFF TRYSFYIEID CYSMNEEDSR 420
  421 KWEGWIESKL RFLISNLEST PKMKFAVPYP KGFTNNLHKA NNPDQICTSF FMGLSFNFSN 480
  481 TPGADKSVDL TKAVTEFTGI IKDWLRTQPN PDTMDIKVQY IKKKQLPAFV KDEGPEEPVK 540
  541 TTKKRSSTGE PSATRKKLKS ENSDNKLNSP KSPITTNINS TPTTSTPTTT ANTTTNTTTA 600
  601 TTTTTTTTVP ITSTPTSNIS SPTMNSTELT TPTSTSTTTS NDSITTPPTT TTINSVQPPS 660
  661 AQPTENGSST SNSPTSTSIN NTALPPNPTT NSESTIETTI TLPTTLESQT STLKDSNEIS 720
  721 TNGTAVATEP TITSPSVNIN ESSTSTSTTT TTTVTEQQIQ TAPTTATPIN KTIVNTMEVN 780
  781 ELSFISSSSE TSQSKPPPKK PTISIIRGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle