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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60467380
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDYIQLEVL DKKVEEFPDG ASIPKEKKAI FSVQGMTCSS CVGIIESFVS NVEGVISIQV  60
   61 ALLQETAEVK FNPLILSEDD IVEQISMVGF EAKHLVQAEN NTIVLNIGGM TCSSCVGIIE 120
  121 NYVSNVDGVI ECRVNLAMET ARVVYDPDLT GVRDIIRNIE DVGFTAQIPS QNFDDTKNIQ 180
  181 KEEAEKLKKN LIFSTFFTVP VFLIGMVLHK ISFFNFLYTN NILHGISYAD SIMLCLTTPV 240
  241 QFLVGKRFYV NGYKSLKHGG ANMDVLVALG TSCAYFYSLM VLLMDYTSED GGSTVGMKTF 300
  301 FDTSASLITF ILLGKYLEVI AKGKTSEAIK KLMGLQATKA LLLTIDQNEG GGGGGGSDNK 360
  361 TTTTILEERE IDIDLVQRGD YLKVLPGSKV PTDGIVVSGL SHIDESIITG ESLPVSKKSG 420
  421 DKLIGGTLNQ KGVLVMKATR IGGETSLSQI IKLVEKAQTE RAPIQSLADK VSGYFVPSVI 480
  481 TLGLLTFIVW LIAGSSGVAS DYIKASNSSV FQFALRNAIS VIVIACPCAL GLATPTAVMV 540
  541 GTGIGAQNGI LIKGGSHLET AHKISAIIFD KTGTLTTGKP IVSNVNIFGN LNNNNNGNNN 600
  601 SGKINKKTFF QMVASAEAAS EHPLAGAIVN YAFEVCDVQS TTPPLSFESI TGSGIRATLA 660
  661 PNNIEIMIGN LKWIKSEGIS YDPTLTISPD RSINNNHHHN DDDDDDEGTL SHIEDQVRRL 720
  721 ESDGNTVVYV VIDRQLMGYI AISDQLKPEA HATITELNKM GICTWMVTGD NPRTANAIAQ 780
  781 QVGIDQVFAE VLPSNKSKKV MELKKMGHTV AMIGDGINDS PALAEADVGI AIGAGTDIAI 840
  841 EAADIVLVKS DLRDVITAIS LSKTTFNRIR FNYLWATLYN ILGIPLAAGL LIPFGISIPP 900
  901 MMAGLAMAFS SISVVLSSLH LKTYQKPDIP IHSRTTEETR QRIHKEQSQL FKKNKIIFES 960
  961 SPTISSKSNN KIEKLSLLSD HDNIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle