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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLBLB_DICDI
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLKSNFIL NIVILFTILI FNINFINCEN QKQQQHQQQQ QQQQQQSSST TTTLPIYSIK  60
   61 FSSETGFTIY SGNDSTSIAQ SGFSNEMMTM GWAYLTITTN SQFEDSLQAE AAGYIEGYLT 120
  121 FEMIWQCWYN ILVNEYQNQT IPNQVLNWAN ENIAYMKQQV ATNENDPYWI NIGLVLTQLS 180
  181 GMVDGYNAAN QDPSRQLSFL DFILINMDAD LGDISSTFNQ STSFSEISNF KKSMDHIKKT 240
  241 DHCSGLIKLT DDLTELYSAH TSWSSYINML RIFKSYNFKF SSITNIKSKL TLFSGYPATI 300
  301 ASLDDFYLLD TKLVVLETTN GLNNNDLYYL IKPESVLTWM RVIIANRLAN GGQSWCETFE 360
  361 RENSGTYNNQ WMIVDYNKFV PGVKVRDGTL FVLEQVPGYI EFADVTNVLR TGYWPSYNIP 420
  421 YFETIFNMSG FNDELTDSSD YEAYEEDARS QIFRRDANKV YSLTDFQAIM RYNNFQNDPL 480
  481 SHGDAANQIS SRFDLNSPDS QDYDAFGGVD SKVTSFSLVN QLLVIAQSGP THDQEPPFQW 540
  541 SSANWSNIYP SIGMPNLYDF GWVNFTDISY NY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle