YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60469878
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNLCLIIL SLSLIGLTRS TQISDEYVNF VAFSDSECLT PALNGFGYSM ATKTCTTLDY  60
   61 INNFLFTVDS GEVSWGSYEN NYYEGETCTL PNSPSVSYPV NSCIQSSTVY INMNSGKTNT 120
  121 PFYYKLTTSS TPYIAQNSFI YTYMGEQCSP NNIVALEYYL NDTRLFKNLS SYLYYCDPNT 180
  181 HFPVTQFCAD YPSECNPPPS QNQPHCFATQ PFYNTSGDSS ITSICPTCCT SGSSCATSGG 240
  241 STGSYTGEGW SKPENEKQQI IKLEKQDKPF TVTNSNDQIA YYKYLYCS

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	288	0.99