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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60468258
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMMMIVILE VTKYTFKAFI VVFSFIMVLA GFYMNVEVHP SGTPLQFHET VYFLVITLAT  60
   61 VGYGDIYPTT ALGQITITLA LTIGAGVLIP YHISKLMEKL QQDSPFLRNL SSSSITGHVI 120
  121 LCGDITISHL LDFLSEFYHE RYGKLKKELV ILSPKAPDDR IKALLLHPFY KNRLIYLKGS 180
  181 PLFEHDLQRT KISKADSVFI TLPSSWNSAD TDNILCSYAV KSQYKNLKIF SHLISSKNKN 240
  241 KSPFLKGSIY VEEFRCAMLA QSIVCPGYNI LFSNLFTSRT IPTMVSHKWL TEYYYGTNHS 300
  301 IYIIKVPEFL VGEQLTDVIL SMYFGNGSLL IGIMEPQIVV SVCSQQGPSL TSSGTYIPTS 360
  361 QKPTTLPPKF HLNPPQTTIL TIDMQLVLIS HTVNLTSKHS SRAEKRQQQK QQEIQKRKKI 420
  421 QINSIGGEYD DENTDDTDFQ SMNEVLNFNS NLTNNNLNNS LTNNNNNLNN NDDDYNNNNF 480
  481 IIKIYKKINQ FFNKLAVPDL ELLINEVEQQ NNQETKDQAM NESLKTFIVS NKSKNKDNNG 540
  541 SGGNGSGGNG FSRGGSSMNF RNNSMTGFGS LSSPQSIDEN LDQSIMEFNR EHEEEELTSK 600
  601 ELIKSLCLSE YNGDWIALLS DISSQKTSNP KTEEILERIR LVIDKHSLMT FTTHGKFGKG 660
  661 KKGSKNSMKG HMLIICKSLR GLDLFLHHLR LPYISSIKTN TMAKSGVQPI VVLYKDEPQD 720
  721 ESWFSTVKTL PLIAFIKGSS SNNVDLDKCG AKNAETIIIT SDPYYDQSNL SSAQENLVDS 780
  781 FTLMSYVDVI KVNRIAKITV ELVHEPNIRF LEDKKIQACG SNKRFHTYLQ ANQEKTFLKP 840
  841 EFFSTPHYAS GGVITFTVLD SLTCQAHNNH LIKDVAHELA FGVNGLSQSY STFGLSSCVN 900
  901 QDSKCFSRLI GIPAMFHGRS YGEVLKYFLQ QKNLLVLGLY RSKIPMSAPV DYIYTCPPPT 960
  961 CILHEGDQAY VLSNSPI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle