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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60462336
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNINILIFI FIYLIGFVLS DDDELKIIRV ERIDEIEYGS IDCSIRFNVL IDYPRPLVFV  60
   61 SGIGGVVNGD AKVKNGTLTI YQIRHTVLVG NNSVSFQAHD YTNYQYPYPV YINKTDYAIA 120
  121 QCDQLPSNVK FVSKQNRWNS ISGFGTPFNW FKLLNPINLD IGKGFSNYEF VCQVPQPYGC 180
  181 YFYPAQNGGY QKRNYWLIVF IQATNTYIPF NPTTNVLIKS KQGTIAFNST FDGLKDPTNP 240
  241 PMQLLNFESF PPINSVLSFG EMTNHATFQT QIINNKNTLT SISKEDDEMI QSQLIPLLGS 300
  301 TSNATFIGIS EFSTATQNNK MHLQIVDNQG AKRIGGDISI STKLKDSSAS FDSDIKTSII 360
  361 NETNFGSRYI YHTNVKFDTS YDPTMTVSFD DQFSYEVIPP SFPYGISNGT LRNHSISISS 420
  421 ATGSFYSGNL NCYRNGDHSK SEKIANIISS NTDLNPAVIS EVELFNLSFD KVLIRIKAND 480
  481 DISGIKYLDV FRFKIQSSDL VWGNPMNGVY EAIASVIEYS TMKTIPVISF DYKGNNQGID 540
  541 QDNPIIDTNF NKVPNFPTLN YIKDKKLDPF NFTSFSFKYN DIDVSNQAFN NTLCFGLSGA 600
  601 DKGMVPQFFL LYSPTNMKAY ETDKPFIGAW DPLKNQFCID FIIPARIFSG EINYIIFFSP 660
  661 FIYDRGYIIN SVGSTAQLRV LSNYADQLPP IITEFNAYPS TNVNVNSEKI IGWDLRIEDL 720
  721 TNGLLSAEFN ITSEYDLNPI TIKLTPNNAV SGNDKSGVYQ LRFPVSPNCR SQSYRISSAK 780
  781 LTDAQGHFGV TPSTYNFNPF IKFLSSNQLR INTTCPIGNN DNESPILNSF KSSLVSIDVG 840
  841 GFKENRTVVF EFTTSDSGSG ISTRHNPLVY LSKPTSSKIS CQSKLLSYTN GQANYSCSIE 900
  901 LPYGFGAHDA LLISIYGIVD NQSNMNGYSS FDLKSLGFQY SLLSQFSDIP VLESTSSITN 960
  961 QASTLTIYGH KFGIDSSKVT LQVNYNNGQG WKNTSVSFYA GIVLITDSIT PTSTPFYVRV1020
 1021 IVNNIISNQI IVTPTLIPTQ CNYQVDQTII SKWINSEVYH YLQASITIKN NGIKPIKAFS1080
 1081 FMMSNIDQIW GVTISSGPTY SLPSWNPTIN PGNEYTFGYI LKGTDVGQLV NVMVDCS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle