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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60474443
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSISIIFSL FLIINLVFSA DPTIVSFRKP VERVYPGEYC LPSFTVLVNY PDPIQYNYQL  60
   61 GLFDKSGGYG SNIPSAVNGT LYLFTLTHKV PIGKNQPVSL YIQDYSKNPW FTFDFNNYTT 120
  121 YDCDPLPPVT MKSKQNTWIR SSGQYTNLVW YHMVEVSGLD KSAPYDAFTC NVPEPFYCAF 180
  181 QEFLNGPKPI NYYFQIAIRK SDVNFTPFNV TITDKQGKVL LNSLFDGLSA PANPPVSIRS 240
  241 LENYPINGST VTKNEMVNDA MYIMNIINKN ALCGISSPKD YFIGNTLIPV LGTPSNATYI 300
  301 GFSSFLYQNG PIESHVQIID SQGTKRIGID NVLLINPKSY DNVIENVQNA TYVKSSNINK 360
  361 TLINIKADVS FNPKTSHTSS FLSSQRETVL DYPYGYSNGT IKYHSVSFSK TSPEYSTSSN 420
  421 SYMSINSPSD IGNGNSSLIE IATNSTIDSK IPQLLKVETV FLSYEKVLVR IFAKDVDSGI 480
  481 SYLHSTNLHK ISPADLVYGD NFNGVYETVE TLATMYGNER PTVSIYDNAG NNIQYNSMQP 540
  541 TFDTSFNMIP EYPVYTMIKN QANLDPYTFT GFEFKYNDVD VSNGPFNNTL CMNFAGSNKT 600
  601 MTPRFLQLPL ALNPEKASLD NATPGSWDEV KGMFCMDFQI PARIFTGEYT YAVLIPPFVY 660
  661 DSYYFAISVG SKAQLRVNSG FADQMPPIIT EFSSYPSNAV NVTQDTVVGW NIRIEDSPNG 720
  721 LASGEFNITS DFDLEPYRIK ITPANAVSGD IFSSTYQLRI PIKANTCRSQ SFRISSASIT 780
  781 DTMGHTSVLP SSGNVNPLYK FLESPHLVLN ITCPQAIIDN TPPSLISFST VSSIEVGAYK 840
  841 DFRNVTFTFK TSDSGSGISS RHNPKIYLSS GEFDQISKIS TLVSNVNGVA TYTCTIELPY 900
  901 GYGSYNGILV SIYGIVDNKL NINGYSSVDL QQLGFQNTIK VLYSDVPVLD YTSSIKSTES 960
  961 SLTIYGHKFG IDRSKVTLQV DYQNGQGWKN TTISFFSGII LMTDNITPTS TPFYVRVIVD1020
 1021 GKISNQLLVV PIVVGDSPCS YEVIQSIVAT WIDSEKYPYL QASITIKNTG TRPIKAFSFI1080
 1081 IEKIAYGQIW GVDANGNNRY TLPSYNLIIN PRDQYSFGYI IQGTTVADLK QVTYTCL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle