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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IREA_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFSKTRNKI IFLLFLIIIN IFNINAYIKD ENEDDLSLLI STLDGNIYSF NYESGELNWD  60
   61 LKPNGGDSLY STSQFDRKQQ QSTSTSTEIT KSSPSILIPT LDGSGLLFQY SNDRLHQVPF 120
  121 SLQELVNTSP LFLKELEDKS STSSTSTTSE SSKDENKVTM FIGNKKTSIT VVDSQTGEII 180
  181 KSMSKDGLWL TDEDDCPVNI IPDEALMFTR SDYQIIALDP KSGVEKWNLS VGEYIPHSTK 240
  241 SFYNSEISLN FEGLIEVASL SQRMYKIYIK KPEKTVVGIS HNYWEHILTS SPVSIYAYSS 300
  301 KKHILKKLDF HRKVSPYSNS LIPVASTDLM IPSNFDRTFM FDDYYGQLFI VSPPSNNNNN 360
  361 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNK NNNNNNKNES DKSNLTPLTP YDPSKPNGAN 420
  421 NNNNNNNDLL DSNKLKNYDI YLYSSIVILI TSIIVFIRSK KNFNLINVNN NNNQNNNQNS 480
  481 NQNNNINNKK TPKKKKKKQK NKNNKNNNDE DDENEIENYN DNQNDLIDEF ISTNSVIQQQ 540
  541 QQQQQQLINS SNKINNGSGK IILDNGNVKI GKLEIITNKI LGTGSCGTIV YEGKMEGRKV 600
  601 AVKRMLSQFV KFADREVSIL IHSDEHTNVV RYYAKEEDDE FIYLAISFCQ KSLDMYVQQT 660
  661 LSLQISPTDS PSIQSSNNNG NGNNGNNNNN NQIIIDNKTK QMILELFKGL EHLHSLNIVH 720
  721 RDIKPHNVLI DPNNRVKISD MGLGKLLDND DQSLTFTSDS HGWQPAEYLN GTNRNTKKVD 780
  781 IFSLGCVVYY LLTGAHPFGH RYNREKNVLK GKFDIDQIKH LPDIHQLVHS MIQFEPEKRP 840
  841 DIGECINHPF FWEVHKKLSF LVAASDYLEF EKPTSPLNLE IDSHVDLVTD GSGDWWLKID 900
  901 QVLIDNIGRY RKYNGKSIRD LLRVIRNKFN HYRDLSPEEQ TCLGILPDGF FNYFDLKFPQ 960
  961 LFIVTYLFIL KNLKNDQYFV QYYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle