YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60464910
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLFITFIL STLLLSVVCI VKSQSDSYKP ILLMHGFAIS EDCGANTDWD TMLKYIQKNN  60
   61 PDQIAIALDV DNHLKSTKPM FTQINDIYLL MTSILENNSS FANGFHIIAH SQGALLMRSL 120
  121 VEMYGFKVDN FISLAGVHNG VFGVGFTNDY WFGNFTDKEL TDLMYSSSMQ KEFSVANWWN 180
  181 DPKDNDRYIK ENFFLPALNQ ELSELTPEFK ANFVSSIGGS FNAFGSQDDE VVDPWISELF 240
  241 GYYNENMVMI PINETYSYQQ DSYGLKTLDN QGKLKLTQVD GVKHADWLRR EDLFNQYILP 300
  301 LISK

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	304	0.99