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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MANF_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNFYYFILI LLFFNEVCYS LKDGEIKLHL IPHSHCDSGW TSTMNEYYMG QVKSIISSMV  60
   61 QSLNVESNPP RKFVWSEIGF LEQWWDDMPI EIKNDFIKHV KNDRIEFVNG GWVMNDEACA 120
  121 SLESVIRQLS NGHKFIREKF GKQPESGWQI DPFGHSSLTP TLQAQFGYKH VVLNRIHYEL 180
  181 KKKFKEEKNL QFKWRGSPEG VGPKSDILAH VFDDFYTSPP HMSFDGYNFL AYGLPRLTME 240
  241 MIELARNRSV FYKSPHVLIP MGGDFAFKNA YKSFEQMDQL VASINGQHAN GESNVICQYS 300
  301 TLADFFSDTI NWHNENKVSF NYYDSDFFPY ADDSNTYWTG YYTSRPLLKG YERHVSSKLR 360
  361 SAEILSALQN DEKYYPNQLL NASKQVSILQ HHDAISGTSK KHVVQDYFSR LQKADILVSE 420
  421 QSEKLLASAL SQHSPTKLDI IDIGGSLNFP KNNDAISFIL FNQLSWSKEE LISIKVQSVG 480
  481 DHGESLNSPT NNACPYVLAQ EDFLNEIEID CSPRSDFKSD QSDDHKEFIQ IDFPAKLKPF 540
  541 SSKLYYLKRK SNPNKSNWVL PKTNHFNSIE NSIYTANLDE NYLIKSLKSK SSRHGGGANQ 600
  601 ITEINQQLLT YSDIGGAYIF RTNKQVFQPP RQVYSTFTYI GKFYQEAQSI LQDTHQISNR 660
  661 NGYYYYYGNN QQQQQQQQTI STFNYNSIKL INTGNEMIDK KINFNFHIRG INGTTTINRF 720
  721 TTDIDNNREL YSDNGLEMMH RKSISSQSVE VGRETQSYYP TINSVYIESQ STGKRFVCNN 780
  781 DRSRGVSSQG QGCLEMALHR SLTYEDGKGL EIPAIDESSI NARFECYLDE VPSNSQQSNG 840
  841 GGGGDDIRKQ SINYQHKFQI YQGQDSSYMS SKSFMLKPLP EFIHILSMER SGPRSIKLRI 900
  901 HNIENNNQSP ITFDLNGLFS FIKSIKSIKE YNLSLINRFV DNNIDNIISS HRSIVGKNLF 960
  961 PIKDTPTRFN PINTKQTKIT LYPSEIKAIE ITYH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle