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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CLCE_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRKENEESE SLSSSSSPID NSNNNNNNNN HSIFNPIGHI QNAFNNIDLN PLNVDFKGHT  60
   61 DKVVNFFQHG TGDLNDRMQG VVSKLRSNEY RKKMHSVLTK IKDTKEYKST SNTDYDVIFE 120
  121 SVDMYSNLQQ DPTMDKDEID VVTDLSSYKK KFTHWLGKER ISTLLFIPTL GILIALMGIL 180
  181 CDFLLMELGT LRDFVTSRHN SHVIPTDGTT PTPNSSIADK YDLVEGIVFV GYSVFFALIS 240
  241 VCCISFISPY AVGSGIPEMK SIMSGINLSR VLGFKTLVSK IVGMVCASAA GLTIGRTGPF 300
  301 MHASAIISQM LMNLKVFGAI KKNQIVRYQM LICALTSGVV ANFGAPIGGL LFAIEVTATT 360
  361 AVMGNLWKGF LCATTTAIIF FLSRSTFSKG NFHSVYEFEF VPKEYGVADL ITFVGIGIIT 420
  421 GLIGAFFVFI YEKLVRFRLR YPILKQSRII LVLVVSLFSA IITYSAGPLC RVSLPTAMKQ 480
  481 FLGQNEPKPF LFEQDQTPYY KYLNLLVFIV VKLILTAFNI VLPIPGGAIT PFIVTGAALG 540
  541 RLFGEILKDH FDSQAIEPAG FAAIASAGLV SGTIRNISPS IFVLELTGQL SLLVPILICS 600
  601 ITSTAVGNFF NRPLFDTALK IQGLPFLSNY RSSKVYTMTA KQVMKKNINY LSMTSTVIEM 660
  661 KNFLDTFKYT FIPIVDSKEN MLLVGIVERS SMIYMLDIHI ENIEQKIDEF KSKYFVNNNN 720
  721 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NSNNSENLEI ENTGAILNTN 780
  781 SNNNNSDEED YDRKDNDKIS LIKPNQDESS SNSNGGSSSD FEEILNTQNT NINKNDNEDL 840
  841 IKEIEDENSS LGEKPIIEHD DEDDDEEEGD GIPLVSMKDQ QPVLRNRHTT TTTTTTTTTP 900
  901 ITENIYVNDA FEISINDLKN GGQSVWGKHI LGDIIHSGET ALLMDLAPSQ VPDLTPLNKV 960
  961 FHLFTMLGLG FTYVTSLGKL VGVITKNSLM EQDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle