YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60467930
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEENIIFDCI VIGAGLSGLK TANLLKNQNI NVLVLEAKDV FGGRTDSIQF ENYSWDIGGQ  60
   61 WVGPTQYRIN ELIKECNQSI FPQQQKGKKV LEINGKLYRY SSLIPPVGLQ YIIEIQIVMW 120
  121 RIDYLANQIK DLKNISQWKK CEYYDSISFQ DWINQNIFFE TSKKLIEITI LAIFSSQPKN 180
  181 LSMLFVLTYF KSSGGVVKAM EVEGGAQQDR VFGSSHNLSK ILSKKLLFPS KLTNNSGTFF 240
  241 YGNNGNIKLN SQVFKVEQDY NNQNQNRNEN NENNENNLIR ISSKNVITNE ISYYLCKNLV 300
  301 ITVPPNLADS IIYQPELPNE RRLLTKSMEM GKVIKFIIFY DQCWWRELGF SGEIVNDGSS 360
  361 ISFCYDGSFE DGSKPSIIGF FEGDYTDEWS MKSESERKEE AIKIIYKSFN SDQRALTPKH 420
  421 YIDKDWTKNQ WSKGGYGCII GSNKNYHKYN ESLRKQIGNI HFAGTETSTE WSGYMEGALE 480
  481 SAERVSNEII PKFIPNYKPL INQQQQQQQQ QQQQQQQQQQ QQQQKIGFLN SIIIIVSMLT 540
  541 FCFYLIFNLY SNKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle