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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MANA_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIKKLFILI FCLFLIINEI NGKKTKINDI KKSKPKLSST LLNVHIVAHT HDDVGWLKTV  60
   61 DEYYYGSNMS IAFAGVQYTL DTAITCLLAN PERKFIYVEI AFFQRWWDEQ STTMQNIVKG 120
  121 LVESGQLEFI NGGYCMNDEA TTYYDDTIDQ MTLGHQFLWE NFGVMPKIGW HIDPFGHSAT 180
  181 QARIFGQLGF DAFIIGRMDY QDIEARLENK QMEFMWRSTQ STPENQVFTS VLRAMYCTPD 240
  241 GFNFEQGDDP IQDDPNLFDN NVDSRAEQFT QVALEYATHY RTNNVLIPFG CDFAYLNAQM 300
  301 YYKNIDKLIA HINSNPDKYG LNLLYSTPSI YIDAVNDANL VWEVKTDDLF PYADNEFSYW 360
  361 TGYFVSRPAL KGYVRQNNAL LHVVEQMLVT SSNLMPSSRS EQLVDDIVIM REVMGIAQHH 420
  421 DAVSGTEQQH VADDYAERLS IGNCASLETI NTVVGTLLTA NGNSKSAAAT PTISFCPLLN 480
  481 QSICPATDPL SSGTSVPVLI YNSLSWTRNE PVRIPIPIAN VTVTSSSNGS ITSQVNQING 540
  541 TFILEFLATI PPLGYSTYII TSTASDFVEP NSIPAIIIQD EIIVSGGGKI NEKVSYNDPI 600
  601 ILENDYINVQ FSSQDGSILS ITNKTSGVTS SITQEYIWYN PSVGNDDSAQ CSGAYIFRPV 660
  661 EDFAYPYNNA TPSVSIIRGE ISSSIRRFWS NEMVQTFRLY SNADHLEVEE IIGPIDISDG 720
  721 IGKEIVSRYT TTLVTDQTWY SDSQGMEMQK RITNYRPSWN LTVVQPTSGN YVPVNAIAYI 780
  781 QDPNQSLQFT IVTDRSRGCA SLRDGQLDMM MHRRTLKDDG RGVGQPMNES TQIVTTSKLI 840
  841 FHDISSYAQS HYRPAALSLS HPLLPMFTTT QQSSNDWNSQ YQGVYSPLTS ASPLPNGLKI 900
  901 QTLQWLDNQD NTILLRIENI YQIDGQDSQD PQTITLDLST IFSTITITSA TEMNLTGVQK 960
  961 LSNLSRLKWK TVDGKNYDHK SSSSTKEDSS NGFVFTFSPM QIRTFIITTN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle