YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FDFT_DICDI
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYMKSLAHP DEFLSLLKIG YTESFKPKSQ LKENLGNKEW CYELLNKTSR SFAFVINELE  60
   61 PSLKDAICIF YLVLRGLDTI EDDTTVELNT KLPVLTSFSE GLYQPGYKVF GYGMNNDEKN 120
  121 LVENFDKVVD VFLGLGDGYC TIIHDITRRM ANGMSEFLQK SVVTLPEWDL YCHYVAGLVG 180
  181 IGLSKIFHAS GLESEWFATA DDESNQMGLF LQKTNIIRDY LEDINEKRIF WPRDVWARYT 240
  241 LHLENFKEAK YQIPALHCLN DLITNALSHA LIALDYMSRL KNPQVINFCA IPQVMAIGTL 300
  301 NACYNNYNVF TGVVKIRKGQ RALIVDAIQS KGLTATYELF FKFANEMRHK VPPNDPSAKK 360
  361 TIQHLESIEK LCIEKLGYRP SGFNDFISYD WMAVTSLAVS SAFLIARHGP NFFSKL

Type	Start	End	Confidence
Non-Cytoplasmic	1	388	0.84
Transmembrane Helix	389	408	0.60
Cytoplasmic	409	416	0.48