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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60463184
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSTPTSNT TTTTTSNSNK NDVHTESNGI FTLTEYKTLT VICDTLFSDD SEIALNEIEN  60
   61 LLPKNSKNSD ENHKEHQLNI LKEYFKRKSS DLDVAGHFLK LIVATKSSSQ ISDLKTLLGL 120
  121 FSTTGAGIIL TGQFSSFVNL PLKSRQQVLT MMKSSSNPIR RQAFKAIVPL AISIYYSVIG 180
  181 DRGETSNPNW DAVGYDTPPP PEQIPGEEKL SFIKITSETS LKADVVVIGS GAGGGVTAAL 240
  241 LAEAGYKVIV LEKGSYISSN NMTWKESEAF PLLYEQAGTL TSDDLSVNIL AGNCLGGGTT 300
  301 VNWTASIRTP DIILEEWRKQ CPNAFDSIKF NNAMDSVSSR LNVNTIDTAL DGTGAHNRNN 360
  361 KLLEQALREL DADPQPIPRN TKNCDTTQCG NCSMGCRSKS KQSSMVTYLE DCCSKGGQII 420
  421 TNCQAEEITT TTIPTNSTTT NGGGGQTVHG VIAYVSTPDG LKYRVFIKSH IVVCSAGALH 480
  481 TPTLLLKSRI KNSNIGNNLY LHPVVPIIGE HTQPVEVWKG PPMTVISKKY QKILPNSGKN 540
  541 TGSILETPNS HIALSGSNCA FMWDDSFNFK KRMLKARYYS GFISICRDTV PGKIRLDKDG 600
  601 RSPKIQYTLS DRDWKSMLPS IEASLRALIK IGAIEASIPI SGFKPGNQDT IEQYIKAIKS 660
  661 NGYKSNQTVI LSAHQMGSCR MGSSKSNSVV NENGESWDVK RLFIADGSVL PSSVGVNPMI 720
  721 TIYAISHIIA NQIIQLYPLP NTNNLNSNNN TTTTTNIGSS TTITANLNND SPTQIAYERD 780
  781 N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle