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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60463162
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKINKSKFG FLIFLTFLVI NFSKSIQFNN QINFNDNGNE ILNNIEDQRF NNVLLDLHME  60
   61 RDYKDGNKQI STVYGLIERL FNFEMTLFFK LKIEESEWMT GEYYEISTES VENEDSSKNI 120
  121 TFVTIRADSG VNLAMGLQYY LKYYCFCSYT WSGDQCSITS YSQLPAVTEG SVSIPVISAY 180
  181 RYYMNVCTFG YSTTWWNWSR WEREIDWMAL NGYNLPLAFV GQEYIWYRVF SELGLSFDQI 240
  241 STWLTGPAFL PWNRMGNVNG WGGPITLDWL EKQRDLQIKI LERMRQYGMK PVLPGFAGHI 300
  301 PGAIQQLFPQ ANISVLSTWC NFNGTFYLES TDPLFAKITT MFIGELIDVF GTDHFYNFDP 360
  361 FNELEPPSND TDYLRQTSQS MYENVLLADP KAVWVLQGWF IVDAPEFWQA KQTEAWFSGV 420
  421 PIGGVLVLDL WSDVIPGWTT TNYYYGHYWV WCMLHNFGGR SGMYGRLPWI SSNPITARGL 480
  481 SPNMVGIGLT PEAIEQNVVV YDMMSEMSWR SVQPNLTEWV TQYTHRRYGK LVPEIVDVWI 540
  541 SLVNTVFNAT AATARANMGA PESFIALRPQ LTFGNNSFYN PNILYNAWNV FSMVDDEYVI 600
  601 STETFEFDIS EFTMQSLSNY FMDQYFLLIE AFNASDVQTL STISIELLDI INYMDEIAST 660
  661 QSSLQLGLWT YRARLWAYPT NDIPTLQNSS NSNTAPYEFN ARNVLTLWGP SNSVLHDYAF 720
  721 KLWSGLVSDF YSPRWQLFLK SLVQSVENRK PFNKESFNRM VENLEEQWVV QQTIYPTVPV 780
  781 GQAYNTSKYI QTHLKINF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle