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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60463436
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSFKGDRLV VNINDDNDDD SKSSLLEEFK SSNKLDGFHN KKKSNYRRCL DFFKKLLLPV  60
   61 GKMPHEDRLN MDWLQKWRKY NRFPFKLLIH LALTVCLTTT IFLQTGDLTV YSVGIEATWY 120
  121 NIFFPTDFQY EGDYGANIMY LYTINETISM IKDNLEAYNS LEDTSVNRFQ VYSPTNGDFS 180
  181 PPYNATMTIA SYKHCDQVFD TSLVNANTAT ETIAYTISSD NLGPFQSYID SGSGNDNDND 240
  241 SNSNSNSGNH NSETIQQLFY CMSEMKVKYS FTNVHLQYEH PVAYLWDVYV IFNNIEQAGR 300
  301 IELSIHSEKT RISEPPYGKL LQSSKLILDS FIIVLSILSQ ILAWRSFVFS FKTYQRTKRL 360
  361 LRRNSTRSLL TVNWKSLSWK TKLRFFNLWF VLCLISNVLT IAGAILDFFE VPGTVSSTAT 420
  421 KVLIGLGTLL SWINMIRYLE FDTKSTSLIR ALINGLPEII RFSAGSLPIF IGFCLFGLMV 480
  481 FSEHTLRFAS FGEAAITLFG LQNGDDVQAT FRATEKDPII SKMYFFVFVF ISVYCISNIY 540
  541 IAIMESSYSR SIGIKSKLEK KAKEKKKLKE QYGDEINLDD HLWKTLLGLK EEKLDDDDPN 600
  601 SNFNDDDDDD DDDDQSQSNL LNDDDYDDND DDLDDNNNNP NNNNSNNNNN NNNNNNNNKN 660
  661 DDDTSSNISG IQMISSSKKD KKVKKSKKSK SPPLPPSKPH SQINLTESQI IETDRAVSTF 720
  721 DTNAIIEDIS KVIFERQLAF NKEIQNLIKN SIQQRLQDLV ENRQISINNQ QSDNNNNNNN 780
  781 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle