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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: 24106;
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKYPNLQD QVRGNEQQVN QDDEYENIDY VEDDENDNIQ DRNNEQYGQN MRNSKYNQDV  60
   61 QELPAIDINM LNNYFKPDPY LEGLVVDIVD YSSKTDWGIV EHVLYQIKSY KKGKESDFII 120
  121 VQRRYSDFEW LVKEFEQKYI GIILPPLPEK NVLSKINFQK VDLIKRPEFL QDRLTCLKAF 180
  181 LKKVLDHPKL SKTKEFKSFI RDSDNDFSKF KEKSFTQRQS ANEPIGSGMI KKFYNSVSTG 240
  241 LTTAVDYISG TRQKKERQKT KEDEKFENYE RYYQSQKEKI SETTRCLHHI FEFKKKQAEN 300
  301 MTQFSAILDQ LKSQKGVSEL KDTTYKASEQ QAKNSNDLIS SIEGPLKEQI KHFDSCLGIL 360
  361 NHRKELLLKI FENQVKIEYL LRQAGKQDEI DNLRDEVEND ERRLATLQYF FQEDNDYFKN 420
  421 MIYYLLMEGW VQIKRGWFWQ QRYGFISQQG SFKYFDDQAM TKLKRDFRLK DGSNESLQIK 480
  481 TDLHELWYQK LIQAKVQSMN ISYIPQFQAQ EFIRMNEQSP NVQLLEQQNI NPNDAVSPLQ 540
  541 LANTNQYTNM QLQRDQYQPY QQQNQFRTNQ LQNQNQVFQE ENRQNGLQQL AQNPYQQIIR 600
  601 QRNVPQSINP SNQIQPQNNL NSQNNQNKRE VDYNIQKEQQ QQKKDQGVFS KIKDFIIGKK 660
  661 EDYYDEKFVS ELNNNINLKM QAKQKIEEII LPITTQTSLF NYEQYSSTVQ YNFMQYIQLQ 720
  721 NIFDQQRNSF PIKMSLSIFL MFIIVFNLIQ WQKNQLIFTF CSIIISQLCV FFQHLKSKQV 780
  781 AIKCNVQAFT SVPVNISKMY TINQLLEKLS QINKNLSIFE QEKNKELFIL DKNIEFQSVY 840
  841 QIQIKDSKMF SITIFTKNYE YLDSIIENFT SNFTSKTGIW KESVQRPPPN YNPVLDVIGY 900
  901 FVQFGYCLGQ KITFNQEEIQ TQDKINDFEV LFVCVSLFAS FVFRDSFNIQ LILLNNGYSA 960
  961 ICDNVFLIQG DFQLCKVLCG TRSRSGISSQ RQQTSQVKFF QASSIQNYQQ QECSICLEQY1020
 1021 QLYYKMDEFR QFFCNKKMSS LQNRSLKLNI HYKIIDFVCL NNFKYLLKIY SNLMSFSGQG1080
 1081 VDNYDGLYLA KEFQSCNNTR KNSFENMNLP EALNPLEIKN TSITATNKSK KLQSMINYSR1140
 1141 KQESFNLNRR TNTVMSERVQ STKEDYKDIH SNYSQLKTVG EDDVEQKSSS EIAKEFQKQV1200
 1201 YMNTMKLNGK RNGRSSTLPS NDEQIKALQQ FAVQQNNINT HFNKFFKKKI RITNITPGKQ1260
 1261 NTVSNKSTTQ NSLQSSPISY QQKDYTQNNN FMIFSRKSTL ANAASPINDQ KLVIQIQDFY1320
 1321 QNNKTNQLSS YDDSLNQNRN SSKSDTKNLS TPINSVYYKN QDNSQSNDIV YAINPDRFSS1380
 1381 AKIKKKFRGA NGLTPQILEL WINDTLTEAQ SDKQFNDSKY KTHNYLSTYN LDRKNLFSKG1440
 1441 VKHEGIDRIY RCLFVYSFGF YEMLYEILEH LKEKDIIISQ IWKVFGILLE YCARGEFKTT1500
 1501 VCILEKEKEE AVETLKKNIE EKQTLIKEIE QKVYDQGDKY LLEIRSLKAE LESLSNENAR1560
 1561 LSEDNKFLDE QFNQEAKTRL QFEHKINEIY SIHRELNTKF QHLITEKDSL EFDLKNIKAD1620
 1621 YNQRNEEKLL YQTKYTQAAK DLEDQKIINN RISERNKTLE NIILENSSQN DKVSLQNKEL1680
 1681 NEELIKRQLK IDELNFQIDN LKIQIRQYAE SSKRVEEKKS EMLNEKEYYE QRLREKQKLI1740
 1741 NEIQAKLNLK ENQYSEISYK LEYDQAKFKE QAEELKEKQN LIYNLQKQLK GIQIDLEVSQ1800
 1801 NTIKNQEIDM QNLEKCIREY KMGSADLEQQ YIKATKQINQ MQIQLDNQQL EVKKWMILKS1860
 1861 KVTKLEQENR KILNDFQIQT LQLNQFSKEK DEFQNQLFEA QKKLLALKDI NQDQTFHSSN1920
 1921 IENSLTDKIQ IVEELKRQNI QILTNFTDYK IKLEQTQREL TSITRQYNEF QQQTEINIEN1980
 1981 IHAKYLKELR CKDVKIHYME YEDLYASLLR QLDNYRILDE KLKERESTIQ FLKQQKEIIE2040
 2041 ENRRTVEKSK SDLVSKISKL QGQYDASLVE IKNLKQQIEY QKSSTTNQQE QLGRHFTKEL2100
 2101 QETKENYEEQ IKNLNNTLTQ QIKELEGQFK YTLQKNISLK EENEKLQQSK VQLEDEIIQL2160
 2161 KLQSIQPPSS PTRMQSTIQS RTNSKVTKIK ESEPSSPLKS PASIKSPQLK AQVSNDQSQQ2220
 2221 ISLELINKIQ PLQIDKEIQT TNREYIKFQE EDEVQLQVLQ NITNVQQLQN DSKSIIDLYK2280
 2281 VRQLESDSLA TNLQPSVTHR NETDERRDFN KKNLQKVLNK SQERQTNNPN SDTQLNTNNN2340
 2341 NINNINTRPS SVEQKHRVTV IHQRNISTAY EQLKPSERYP TDKYVKKPFL LMEGWVQIKT2400
 2401 GCSWKQRYGF ISKQGSFRYF DDQTMTELKR DFRLKDVQIV QDRMNKIIKL QGSNESLQIK2460
 2461 TDLNELWYQK LIQAKVQSMN ISYIPQFQDQ VFIRMNEQIQ NVQLQEQQNI DPNDAVSALQ2520
 2521 LTNKNNTKQY TNMQLQRDQY YAYIQQNQIR TNQLQNQNQV FQEDNRQNGL QQLAQNLNQQ2580
 2581 ITSQINIPQS MNPSNQIQQQ NNLKAQNRTN QLQNQNQVFQ EENKQNGLQQ LAQYPNQQIT2640
 2641 RQRNIPQSMN PSNQIQPQND LDTQNRTNQL QNQNHVFQEE NRQNEQKQLA QYPNQQITSQ2700
 2701 INIPQSMNPS NQIQPQKNLK AQNRTNQLQN QNQVFQEENK QNGLQQLAQY PKQQITSQRN2760
 2761 IPQSKNPKNQ IQQQNNLDTQ NRTNQLQNQS QVFQKENKQN GLQQLAQYPN QQITSQRNIP2820
 2821 QSMNPSNQIQ PQKNLKAQNR TNQLQNQSQV FQKENKQNGL QQLAQYPNQQ ITSQRNIPQS2880
 2881 MNPSNQIQLQ NNLKAQNRTN QLQNQNQVFQ EENKQNGLQQ LAQYPNQQII RQTNIPQSKN2940
 2941 PNNQIQPQNN LDAQNRTNQL QNQNQVFQEE NKQNGLQQLA QYPNQQIIRQ TNIPQSKNPN3000
 3001 NQIQPQNNLD AQNRTNQLQN QNQVFQEENK QNGQKLAQYP NQQIIRQTNI PQSKNPNNQI3060
 3061 QQQNKLQALN RTNQLQNQNQ VFQEENKQNG LQQLAQYPNQ QIIRQINILQ SMNPNNQIQP3120
 3121 QNNLNAQNNQ NKREVEYKFE KDQQQQKKDQ GVFSNIKDSI IATKQQINKI VKKEDYYDEK3180
 3181 FVLELNSNIN LKRQVNLKID EIIVPIVIQT SLFNQEQNNS TIQYNSMQYI QLQNIFDQQR3240
 3241 NTFPIKISLS IFLMLIIVFN LIQWQKNQLI YTFCSIVISQ LYVLFQHLKS KQVATKYNVQ3300
 3301 AFTAVPLNIS EMYTINQLLE KLCQINKNII IFEKEKNKEL LILDKNIEFE SVYQIQIKDS3360
 3361 TIFSIKIFTK NYEYLDSIIE NFTQNFTSKT GIWKETFQNL QQILTSNTVN PLSQGAENKK3420
 3421 LKKNLYTLTL NQKHLYIKST LTLRINVNDL LSTRVEFFQY YYFFSLNSLR VNVAQGADLE3480
 3481 FVYKDNKQIK LNSSKLAVYK ITNNKNVQSV LNMANYLIKF NYNFLLMEGW VQIKRGCSWK3540
 3541 QRYGFISKQG SFRYFDDQTM TKLKRDFRLK DAKVQSMDIS YIPQFQGQEF IRMNEQIPNV3600
 3601 QLLEQQNIDP NDAVSPLQLR NTNNTNQYTN MQLQRDQYQA YKQQNQIRTN QLQNQNQVFQ3660
 3661 EAKTQNGLQQ LAQYPNQQIT RQRNIPQSMN PSNQIQPQNN LNAENRTNLI QNQNQVFQEE3720
 3721 NKQNGLQQQV QNPNLQMIRQ RNIPQSMNPS NQIQPQNNLN AQNRTNQLQN QKQVFQEENR3780
 3781 QNGLQYLRNI PQSMNPSNQI QPQNNLNAQN RTNLLQNQNK FFQEENRQNG LQQQVQNPNL3840
 3841 QIIRQRNIPQ SMNPSNQIQP QNNLNAQNNQ NKRDVEYKFE KDQQQQKQDQ GVFSNIKDFI3900
 3901 IAAKQQINKI GKKEDYYDEK FVSKLKSHIN LKMQAKQKIE EIILPITTQT SLFNQEHNNS3960
 3961 TIQYNLNQYI QLQNIFDQQR NTFPIKMSLL IFLMFIIVFN LIQWQKKQLI YTFCCIIISQ4020
 4021 LCVLFKHLKS KQVAIKCNVQ AFTAVPLNIS EMYTINQLLE KLCQINKNII IFEQEKNKEL4080
 4081 FILDKNIEFE SVYQIQIKNS KIFSIKIFTK NYEYLDSIIE NFTSNFTSKT GIWKVSQQRP4140
 4141 PPNYNPVLYV ITYFAQFGYC LGQKITFKQE EIQTLDKIND FEVLFVCVSL FASFVFSDSY4200
 4201 NEIFQRTYIR VYKAQVTDLE LVYKDYQQIS LNSSIQTQNK INNNYNVQSV LKITIQQKTK4260
 4261 HFIVKIALLS YSFFNKNGEF RFCFSNKMSC LQIFRRFMIT EKQNKLNYFW RLNYKFFTVG4320
 4321 RLGINKERCL CFLLMEGWVK IKGGSLWQKR YGFISQQGSF RYFDDQTMTE LKRDFRLNDV4380
 4381 QIVQDRIKKI IKLQGINENL QIKTDLHELW YQKLIQARAK SMNISYIPQF QDQNFIRMNE4440
 4441 QRPKVQFLEQ QNIDPNDAVR PRKLRNRNKT NQKTNMQLQG DQYQACKQQN QIRTNQLQNQ4500
 4501 SQVFQEENKQ NGLQQLAQYP NQQITHQQNI PQSIYPSNQI QPQNNLNAQN RTNQLQNQNQ4560
 4561 VFQEENKQNG LQQLTQYPNQ QITHQQNIPQ SIYPSNQIQP QNNLNALNRT NQLQNQNQVF4620
 4621 QEENRQNGLL YQRSIPQSMN QSNQIQPQNN LNAQNRSNQL SNQNQVFQEE NRQNGLQYQR4680
 4681 NIPQSMNPSN QIQPQSNLNT QNRTNQLSNQ NQVFQEENRQ NGLQYQRSIP QSMNQSNQIQ4740
 4741 PQNNLNAQYR SNQLSNQNQV FYQQTIRQGY IPQSMNPSNQ IQPQSNLNTQ NRTNQLSNQN4800
 4801 QVFQEENRQN GLYYQRNILQ SMNPSNQIQP QNNLNAQNNQ FKRDVDNKFE KYQQQQKQHQ4860
 4861 IVFSNFKYFI IASKQQINKI GKNEDYYDEK FVSELNSNIN LKMQAKQKID EIILPITTQT4920
 4921 SLFNQEQNNS TIQYNFNQYI QLQNIFDQQR NTFPLKMSLS IFLMFIIMYN LIQWQKKQLI4980
 4981 YTFCCIIISQ LCVLFKHLKS KQVAIKCNVQ AFTAIPLNIS EMYTINQLLE KLCQINKNII5040
 5041 IFEQEKNKEL FILDKNIEFE SVYQIQIKNS KIFSIKIFTK NYEYLDSIIE NFTSNFTSXX5100
 5101 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XIQTQDKIND FEVQFLCVSL FASFVFSDFY5160
 5161 NISLILLRNG SMVIYYNMQP TNCDF

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