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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48825712
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTNTRPSH GPAGGPGHGG PGRNLGVKGE KPKNFWGTVR RLFGYMSKRM VAIIAVFVLA  60
   61 IAAVIFQIQT PKVLGKATTE IFKGVMAGAQ QMQQGQQVTK FPIDFDKIAQ IIATVIVMYL 120
  121 ISAVFNFLQQ FIMTRVSQRT VYELRHDLEA KMNRVPISYY DTHTNGDIMS RAINDMDNIA 180
  181 STLQQNLTQF VTSAVTLIGV IVMMLSISWQ LTLVALLMIP LSLIIVMIVA PKSQVFFADQ 240
  241 QKSLGLLNNQ VEETYGGHTI VKTFNHTEKD QEVFEKENQN LYAAGWKAQF ISAIIMPLMN 300
  301 FVKNLGYVFV AVLGGVKVAN GNMTLGDVQA FLQYTTQFSQ PITQLASLMN TIQSTVASAE 360
  361 RVFEVLDEEE MSNEKSGLPE EKDTPYKVRF ENVQFGYTPD NLLMTDFNLD VKPGEMVAIV 420
  421 GPTGAGKTTL INLLERFYDV SGGSIRYDGV DTRDLSRDEL RAQFSMVLQD TWLFTGSIYD 480
  481 NIKYGNDDAT DEQIIEAAKA AHVDDFVRKL PEGYNTVLNE DASNISQGQR QLITIARAFL 540
  541 ANPDVLILDE ATSSVDTRTE ILIQKAMNRL LENRTSFVVA HRLSTIRDAD NIIVMNHGSI 600
  601 VETGNHDTLM EKDGFYADLY NSQFSEEEAS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle