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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|845332
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENATITTAK HYKTAGKQYK TNKVNNTRRA TAAAAAAAAA AATTTVTTAA TPTKKRTYRE  60
   61 TATATTVTQR STNKANIAAA IALAAATEAT ASASASATAT ATDATLTASK AAATAAATTD 120
  121 AASGNSNSSS KPSTSTRDKL GEVPLPTVDS NHIISNNNNN NNNNNTSNNN NNNHHSDNSI 180
  181 SENNYEFKSR DKASLSDSKM TLQQMAAVSS NQEPVAPNVA NTMSNSSIIN SQQTTVNATP 240
  241 ATDEAPLGDR SNISRYLHKK FKRLASTTEV DSWSATNGGG ALQASGDAVR TTSLSSNSSL 300
  301 SPPPTTPLAN GHHLMTQQQS HQQVQQQQQQ QTPPPSVAIH EFSANFVNSN HVNAIGHEES 360
  361 IISNSGYKAA GRTRTPLANS NSNTNSTSNS NSNHAANATL SPASFAQHQQ LTQPTTVSPG 420
  421 IPGGAAAPNP ACEKSGRYVC QYCNLICAKP SVLEKHIRAH TNERPYPCDT CGIAFKTKSN 480
  481 LYKHCRSRSH AARARGLEVP ADADDGLSDQ DAELSNSSSE LPSRAGSPYE EPINSPTPSP 540
  541 STLSAAKSAY IQQPPLPTYM QQLPLGSPAA GTLPPTTADN HHSATAQHRQ SIDYKPYKPK 600
  601 FHNASLYSCS SKELQQQQQQ LQIQQQQQQH QLAQQKLSIQ LPLVQQPSLA HPTLSPSTQM 660
  661 KMKHHINSHQ IQLQLQQQQS LLAQQSLLAA MPPGGVYYLG QPSYYNQDTA AAIHQHALAI 720
  721 QQFQIHLAQQ QQQQQQQHPP LVKATPPMQQ PPSLPPQQLV RANSQISSVA TAPATPTPAA 780
  781 NLSTFASSSG GKQVNVAKVQ EHISKLISQN EAIVENKEIL LQKKYPKQLS RSRSFNNANS 840
  841 NNASQHGSNA SALHANNSHN NTNAQMPERE TKVNLAQAIF QKQQHQLQQQ QQQQITQQQQ 900
  901 QQLEQQNYYT YIQQQQECQQ QQLEPPNGVV KRNAYKPGVV MTTPVKQQQQ LPPPPSPLPM 960
  961 QTMQYRQDPA TPVTKIEQPT TAVPVMPLNL SAKPKPTLVT VPVSSLSTSS LAPTPTTSTN1020
 1021 PTSSSKTAPP PAQVNNSIIK NLLLNARGLA VPIGEGDDAV YSCPICASEF RSADDLKLHN1080
 1081 STYCQDASSS APMSPASSPF RSNSISLSLP ELKSHMANSK NPLSLAKLAW SQLKTKRSSL1140
 1141 VLSRLSAAQT PARTSTVTAP TVTASAPAPA VATVTAPSSA PAPQIEALRF VDAPLPSPGP1200
 1201 LLGKTPLVDY AQQSTPRKAQ DSVVITKMHE DRQFVIEAQP AKRIKTSDLV VASSSQQPTS1260
 1261 FNFSFNNQNS SNSVPELQSS KEERLRRFTS SGGSMIPISE CPDLDNSPKM IRTPLLSGGS1320
 1321 FQDVSVKVNN ETGSSSKERK LMALVSGSGL LGVSSGPQHF QSPPINSITA FNPLTLPPMS1380
 1381 GGDKTTPVTP IPHVPGMPGP GSLTPQMPLL PPPPQQLQLP IPSSRGRSPN RKQPSPLLLG1440
 1441 GGSGELKALS PFGGVQNVPS EFSRQPPTPA QRQALQWNSK ETPKKAPFNF LRMADNVKTT1500
 1501 EPEVRHFNLE NVISGKQQEL PLTPLHVDTP NGNAPEETSP VASASASAKS KFLRPTSLPL1560
 1561 KPGTFTPKRH HGITPTANTL PLISPETPRP SKSCVQLYLN GHAYTYLGLK CSTKMFYCTV1620
 1621 NCPQPSYVAG MHKLSMYSVW QVCEENQPHP LGFKLKQVMA LYDSRQRMLG NGSSTAMAGS1680
 1681 GKLSYNLVAS QQIVSSPSTS STSSAFYQGP LKTPPTVTIA ALSEANVAAK ANEEAQAKKL1740
 1741 ETSPSGQPLV GGYESHEDYT YIRGRGRGRY VCSECGIRCK KPSMLKKHIR THTDVRPFTC1800
 1801 SHCNFSFKTK GNLTKHMQSK THFKKCIELG INPGPMPPDS EFLDVDMDFD QQSSTSAGGR1860
 1861 TSSMAGESDS DDYSDNESES SDTDESKSRQ KEHEAARGLL SLSMTPPIPQ SVSPYPQLQD1920
 1921 TPLPAASPAN SIGSSGSQPK RLVCSFTSPK PPFDYQKQEQ YYSNPEESKP KRSVANEESA1980
 1981 PMDLTKPRGS ILLISPSPVS VPAHDLPKSQ AQQMHDVIFG TSGNESGFMK TLISVSDKVR2040
 2041 ISAEMEEQAK HEAEGEDVQL QTYIKEHALH QAKIKQSQFS RSYLINTLYT AASPVMSSSS2100
 2101 TLFTANSRPV MSVNEVPSIE VHEVKTPEAI ESPRSAPEQA PVILAQIAQE ENEEPNIAEP2160
 2161 HNANLPAAVQ QPDVNEFTGV LVNPTAPPTS SVAPTSTTTA APVAPSSTAN STQPAQRTVI2220
 2221 VGEDGFKSST PTSKSGDLQH VSYGRGVPPA PIAGDARPTC TMCSKTFQRQ HQLTLHMNIH2280
 2281 YMERKFKCEP CSISFRTQGH LQKHERSEAH KNKVMMTSTF GVPTTSNPRP FECTDCKIAF2340
 2341 RIHGHLAKHL RSKTHVQKLE CLQKLPFGTY AEIERAGISL TEIDTSDCEN SLISLKLLAQ2400
 2401 KLQEKDPGKL SSYTTPSGMM QLAQDAAGPV SQDSASEDGF SAAIASAIAS LDNDSAGNTP2460
 2461 KRASSMSEDE TVANGLNHSL KRRLPGSFSS TGEESDNPPE SSGEKRARSG QELPVPVAVP2520
 2521 VAASAAASN

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