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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|396418|gb|AAC...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIYMNNSRL FRLSRIVIAL TAASGMMVNT ANAKEEAKAA TQYTQQVNQN YAKSLPFSDR  60
   61 QDFDDAQRGF IAPLLDEGIL RDANGKVYYR ADDYKFDINA AAPETVNPSL WRQSQINGIS 120
  121 GLFKVTDKMY QVRGQDISNI TFVEGEKGII VIDPLVTPPA AKAALDLYFQ HRPQKPIVAV 180
  181 IYTHSHTDHY GGVKGIISEA DVKSGKVQVI APAGFMDEAI SENVLAGNIM SRRALYSYGL 240
  241 LLPHNAQGNV GNGLGVTLAT GDPSIIAPTK TIVRTGEKMI IDGLEFDFLM TPGSEAPAEM 300
  301 HFYIPALKAL CTAENATHTL HNFYTLRGAK TRDTSKWTEY LNETLDMWGN DAEVLFMPHT 360
  361 WPVWGNKHIN DYIGKYRDTI KYIHDQTLHL ANQGYTMNEI GDMIKLPPAL ANNWASRGYY 420
  421 GSVSHNARAV YNFYLGYYDG NPANLHPYGQ VEMGKRYVQA LGGSARVINL AQEANKQGDY 480
  481 RWSAELLKQV IAANPGDQVA KNLQANNFEQ LGYQAESATW RGFYLTGAKE LREGVHKFSH 540
  541 GTTGSPDTIR GMSVEMLFDF MAVRLDSAKA AGKNISLNFN MSNGDNLNLT LNDSVLNYRK 600
  601 TLQPQADASF YISREDLDAV LTGQAKMADL VKAKKAKIIG NGAKLEEIIA CLDNFDLWVN 660
  661 IVTPN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle