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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RH39_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGASRTILS LSLSSSLFTF SKIPHVFPFL RLHKPRFHHA FRPLYSAAAT TSSPTTETNV  60
   61 TDPDQLKHTI LLERLRLRHL KESAKPPQQR PSSVVGVEEE SSIRKKSKKL VENFQELGLS 120
  121 EEVMGALQEL NIEVPTEIQC IGIPAVMERK SVVLGSHTGS GKTLAYLLPI VQLMREDEAN 180
  181 LGKKTKPRRP RTVVLCPTRE LSEQVYRVAK SISHHARFRS ILVSGGSRIR PQEDSLNNAI 240
  241 DMVVGTPGRI LQHIEEGNMV YGDIAYLVLD EADTMFDRGF GPEIRKFLAP LNQRALKTND 300
  301 QGFQTVLVTA TMTMAVQKLV DEEFQGIEHL RTSTLHKKIA NARHDFIKLS GGEDKLEALL 360
  361 QVLEPSLAKG SKVMVFCNTL NSSRAVDHYL SENQISTVNY HGEVPAEQRV ENLKKFKDEE 420
  421 GDCPTLVCTD LAARGLDLDV DHVVMFDFPK NSIDYLHRTG RTARMGAKGK VTSLVSRKDQ 480
  481 MLAARIEEAM RNNESLESLT TDNVRRDAAR THITQEKGRS VKQIREVSKQ RNSRDKPSSS 540
  541 SPPARSTGGK TPVRKSSSSS FSKPRKASSP PEKSSKPKRK ILKTVGSRSI AARGKTGSDR 600
  601 RPGKKLSVVG FRGKSSSARA S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle