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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ALE2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNFAMLLLL ILLLHSLASF PICFARLFPM SLPFTRSKAH QMHFFHPYLN PSVAPTPSPA  60
   61 FSPNPSRIPP LRHKGHHRHR RWHLRRNATA VSPSSHDCQQ TCVEPLTSTP FGSPCGCVFP 120
  121 MKVQLLLSVA PFSIFPVTNE LEIEVAAGTY LEQSQVKIMG ASADSENQGK TVVDINLVPL 180
  181 GEKFDNTTAT LIYQRFRHKK VPLNETVFGD YEVTHISYPG IPSSSPNGDV TGDAPGGLPI 240
  241 PINATTFANK SQGIGFRTIA IIALSGFVLI LVLVGAISII VKWKKIGKSS NAVGPALAPS 300
  301 INKRPGAGSM FSSSARSSGS DSLMSSMATC ALSVKTFTLS ELEKATDRFS AKRVLGEGGF 360
  361 GRVYQGSMED GTEVAVKLLT RDNQNRDREF IAEVEMLSRL HHRNLVKLIG ICIEGRTRCL 420
  421 IYELVHNGSV ESHLHEGTLD WDARLKIALG AARGLAYLHE DSNPRVIHRD FKASNVLLED 480
  481 DFTPKVSDFG LAREATEGSQ HISTRVMGTF GYVAPEYAMT GHLLVKSDVY SYGVVLLELL 540
  541 TGRRPVDMSQ PSGEENLVTW ARPLLANREG LEQLVDPALA GTYNFDDMAK VAAIASMCVH 600
  601 QEVSHRPFMG EVVQALKLIY NDADETCGDY CSQKDSSVPD SADFKGDLAP SDSSWWNLTP 660
  661 RLRYGQASSF ITMDYSSGPL EDMENRPHSA SSIPRVGGLI LPNRSGPLRP MRSRRNFFRL 720
  721 RGSMSEHGGP SSSRHLWSGN GDWL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle