YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33640682, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRRTGAIA IGVGAATAVV LSLVGAKTPV VIGSAAALGV AGGVVAGRKG GGKNADEYLE  60
   61 SGKSKLEKKD FYGAIEDLNK EIEINSQDVA AYSKRANLKE KLGDHKGAID DFTKAIEIDP 120
  121 NHAHPYYNRG FSKWQLGDIQ GAIADYNHAL AIYPLFKDVY FFRGMAKDQI GNFDGAIADY 180
  181 SKVIEIDPDQ LYKYRDECSA YFHRGKAKHS SGNISGAIAD YSKAIEIDPK NDSAYNNRGI 240
  241 IEDDLGQRKL DDFYYQLAIA DYDKAIDINP SNADAYLNRG HTKLNQRDFD GAIADFNHAL 300
  301 NIDPQVDNIY LKRGVAKDEL GNHQGAIADY TKAIEIDPQD ALAYNNRGVA KSKSNDFQGS 360
  361 ISDCTKAIEI DSKYAFAYRN RGHSKKELGD LIGASEDWKK AAELGDQGAA ELLKEERLKT 420
  421 GSLIDQMFQV TIGKQSSNES DGLDLSDTGD TNGKIKELTK VIELNPNYAD AYSLRGVAKF 480
  481 QLDDYQGALE DFDYALEINP NDAETYFMRG NVKGEIGDTE GAISDYSKAI EIDPKDADAF 540
  541 TNRGLAKYDS KDYQGAIADY NKAIEIDPQL ADAYNNRGLV KDELGDHQGA IADYNKSLDI 600
  601 NPQLADAYNN RGLAKYDSKD YQGAIADYNK SLDINPHFAL AYNNRGLAKD ELGNHQGAIA 660
  661 DYNKAIEIKP QYANAYFNRG NAKSDLGDTQ GAIAVYSKSI EINPQYAAAY YNRGNAKRKL 720
  721 GDNQGAIADC SKAIEINPHF ALAYNNRGLA KYDSKDYQGA IADYTKAIEI DPKDADAYSN 780
  781 RGYAKSHLGD TQGAIADYTK AIEIDPKDAP TYYNRGYAKS HLGDTQGAIT DYTKAIEIDP 840
  841 KDSDAYSNRG YAKSHLGDTQ GAIADYTKAI EIDPKDADAY SNRGLVKDEE LGDHQGAIAD 900
  901 YTKAIEINPQ YSNAYYNRGN AKSELKDYQE AIADYTKAIE IDPKDAPAYY NRGNAKSELK 960
  961 DYQEAIADYS KAIEINPQLA LAYNNRGLAK YDSKDYQGTI ADYNKAIEID PQYANAYKNR1020
 1021 GNAKKELGVL KGACEDWKKA AELGNEDAAL LVEEHCQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle