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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33864729, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQSPPFPLL KHPAFKGVSD AALLRLQDSS SLLRFELGQQ LCEPDDIPAR ILVLLQGQAR  60
   61 LVGRHNGRLT TVGKFGPGSL IGAASLLCGS PCENVIASDE VIACAISDEQ WTQLYSEEES 120
  121 FRQWCDQQLW PQELLALLEV LEEGTAETDS SALEKLEQAL KSVKRCLPDA EAIDAALATG 180
  181 GRLYLTSCWG HASLGQSIQA VSDIPDSDRF RQRLVLFPGL SADSAEKEPG GDLVPANAVK 240
  241 KAELLPPVSR YSPERNVVDS LRLIRAEGPI QETLACFQML AQLMKLPFRR DSIEKVLQDN 300
  301 LRRGLTPNLQ LCGQLAASLG LHVMAAKVPS VSGTRLQVPS MLPWKQGFAL VVASSEQGLR 360
  361 LASPKHGMVT VAPDQLAESF PEGIELLLME RSNATPDQKF GPGWFWPALK RYRGVLIQVL 420
  421 AASFVVQLFT LANPLLIQVI IDKVISQRSL DTLQVLGIAL VMVTILEGVL GSLKTFLFAE 480
  481 TTNRIDQRLG AEVIDHLLRL PLGYFDRRPV GELGTRVAEL EKIRNFLTGQ ALTTILDAAF 540
  541 SVIYIMVMVI YSWLLTLIAL SVLPIQIGLT VLGAPLFRRQ FRAAAEENAK TQSHLVEVLT 600
  601 GIQTVKAQNV EMVSRWRWQE FYSQYIARTF EKTITGTALN QTSQVLQKIS QLMVLWIGAS 660
  661 MVLSGDLTLG QLIAFRIISG YVTQPLLRLS TIWQNIQELR VSFERLADVI DTPEESDEVD 720
  721 KSKVMLPPLH GEVRFEGLSF RFRPGQPEVL KDINLEIKAG TFVGIVGQSG SGKSTLMKLL 780
  781 PRLYEPGEGR ILIDGYDIAK VELYSLRRQI GIVPQDPLLF SGTVSENIAL TNPEASSEEI 840
  841 VRAARLANAH DFIMDLPSGY STPVGERGAS LSGGQRQRVA IARTLLSNPK LLVMDEATSA 900
  901 LDYETERKVC DNLLENLDDQ TVFFITHRLS TIRQADVIVM LHQGAVVEVG THEDLMKHRG 960
  961 RYYALYRQQE ST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle