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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46136511, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTFNHFNIK RQAHNLSRTS TDQSWNPFRH VAWNRRSRTL SEAGLEGQQR TRDHTTGEEL  60
   61 THAVTEPGRS GPAREWSAAE TMTDARRSKE DGYDREKMVG GGSPMDGSDD IPTSQRSLVG 120
  121 DENQLRNRKR EDVPAATDQN VDLEKRKLDR RQSSKLFRHV EPKEPFTVRN QLERTFLNSY 180
  181 INILLIAAPV GIALNYIHSV NRIAVFVVNF IAIIPLAAIL SFATEEIALR TGEVLGGLIN 240
  241 ATFGNAVELI VAILALVDGK VIIVQTSLVG SILSNLLLVL GFCFFFGGLR REAQYFNETV 300
  301 AQTAASMLAL AVASVIVPTV FDQAKNTPAT NVARLSRGTA VILLIVYAAY LLFQLKTHSS 360
  361 TFRQEGQKVA AKPWSRGGGG NIRQGIMVPG ALIGGGMTGR EENERLSEML MNPHRLPKSE 420
  421 GDEDEEEEPQ LHFWVAVATL TTATVLIALC AEFMVDSIDA VTKTGGVSEE FVGLILLPIV 480
  481 GNAAEHATAV TVAIKDKMDL AIGVAVGSSM QVALFLIPLL VIIGWGMGND DMNLSFDLFQ 540
  541 VATMFVAVLL VNYLIADGKS HWLEGWLLIC LYSIIATTEK VPHDLRIPGS YNVNSSERQP 600
  601 DPMSRNGTTR NPVPRMGPPH WRQYSKSSLD RSHAEAPVSP ASISTHSTIK DEKRTRIERR 660
  661 CTVTVNEGYT RDEVLLNFDV VGADVKPGML MCISTARDDL RKISAGHGSS SKQNQDASKG 720
  721 TSGTQNGDGA GFKYFFVAKD MPQETKTRNP DVEVYVLKHI ADAFGMKKGS QVLLTMVDAK 780
  781 NPATEASHVE LSFKDQYLSR SDIWRMTVGE LTGRTVYKGQ SVLFMGTIKA QVTAIYVDSR 840
  841 KTHSAFFTRD TRPIFRSESA RYVLFIQMAK EMWEFDAESS GEIMFNKVVN GFLPALFKRW 900
  901 AMLKAKHLVS IVLFARVEYD TGLTAEFDGL AGDFYTGIQP SGLRRPYKDF YRVVVSEMGS 960
  961 GEWTKILHQL KVEFNFFRRD ISLYHHKLNA QAEINGPDSI PKDTPSSRVK AESTYAMYGN1020
 1021 VLEAINLASS QFAHDHIDRD LTRTGISIAV ISPGSGVFEV DYETLRRTTE ALVGNGIGID1080
 1081 LICMPKMPLH SVPLFKYRNP QYSDDHGHAH RSSFSRSFHS RDSTPNHPTP VIGSYQSLGE1140
 1141 SFSPSKGMSL SRRADPLISM ATSDQWCFAL PQWLHVSFWT GASDEALSYE GIALSVSNKV1200
 1201 MQDDEDEFNI RCRMYALQMR SVLETNEIET TPLQVDTHFP ANITEPPSSQ KYRNTGINDT1260
 1261 VYIPSRRAPE GLFEHTSGFQ RFVPDRLARP GEKSLWKQLQ EFDDHRAKIS HGRSRHHSSR1320
 1321 YAKDLDEITR RQLAEDSGLY GTSLPEKRAP ILGGASARKL SMNITDGDKP SPTSLKKSAE1380
 1381 PTPKPPKQIA KQPKLMRQIS LGQRGFGIAA PKAVVAEIKA ETVNASGVSS GEGKQPSTPR1440
 1441 IRPELRPSSP QTITSHPSSV SIQKYRLDAP DTIIEGVPMT PSIPILKRNN SGLDVAAMQL1500
 1501 RTASTTIGSS FNNRQPKRDD DRDLRYSEAL RADDAQKLYT NKLRAGVLSD AVQDLPTTLS1560
 1561 PTTAITPWLT LVNPSNPESL AIDDTVLYSR WQHVYPQITQ MKVQKWKALC CPASVPLTTE1620
 1621 YFPSKTQFDT EYHRHPYTVE QDADDDLVET PKSRQEFIQE LISLRFTQGF QVVVGPLVAR1680
 1681 AFGQNLIKIG DIFSRDQPLE DGTSIFLSVG NSIHQLSCVN GTEVEVNIFM RKPTDTSFTS1740
 1741 QGFSPIYKPA IRTLLDDTYE AREIDLLTPR TDRNWNMIDS YIAGHHNEMS DSLRFWRARF1800
 1801 VLIPVLRKDV PISRTQTGDH AEEVRIEGIK RLAQSWQKYR YIPLSERRYH SVAQQKRRRD1860
 1861 PNPLDIVWKT DDPSVVITAE VETLPLTEGV EGANRKGLVS AKERFKKSNL NLSTLADAMQ1920
 1921 QPVENGGVRL QNRRWHLRLY SACFIGSDMV TWLLDNFEDL DTREDAEALG NALMAHDELK1980
 1981 AANPKDKGIF VHVDKRHQFR DGNYYYQIAS EFAKPHVGWF NTRRTPVPPT PSVESSNRDS2040
 2041 PRTLMSARSG EESGSPASTS TTPTISLHHG GKRPRVVLSK VMKYDVDHRK RSYRPERIDL2100
 2101 HYDRLHNPDG CYHIRIDWMN VTTKLVEDAV ESWAREASQY GLRLVELPIK EACTITETNP2160
 2161 FRKPYHIKLA ARPPDQKPET YIDPNSLGPT TSPNKHFYQT AILKKFDFVL DTEAASNFPS2220
 2221 NVDVSYSWGK PDYKYTQYIH RSGTLLAEIT DEGDLLILAN RLYSNRPAGM RSIDPPPLVE2280
 2281 RGGRMASYGP YSTFGMAESA TLSSPLLKPT HYFHSPALKP ADQQHNKPTP ATSPDPDALN2340
 2341 TEIDEFCKNK TALEEFYREA LEKGQRVQGT PATAPALEAV PEASIPTLGL PPGVLGGNDG2400
 2401 APTKRLNSPM SFLRRSSVQY DGGSSLTGR

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