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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46115126, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLHIKPDPQ QEAHESAPST KSFQHSPEAT GTELERALHG RHLQFIAIGA AVGTGLFIGT  60
   61 GNALATAGPV SLLIAFIFVG TLLFSVMTAL GEMAAYIPVA GAFTTYATRF LDPTFGFAMG 120
  121 WIYWFSWSIT FALELTAAGL IIQYWEKDLS IGIWITVFWF LFTAANFMPV RWFGEFEMWF 180
  181 SSIKVITIIG FIIFSICVNA GVGDQGYIGF KYWKDPGAFN EHIVEGDIGR FVGFWSVLIT 240
  241 AGFSYQGSEL VAIGAGETKD PRKTIPSAMR WTFWGVFSIF IATVFFLGLN IPSTEKGLLS 300
  301 GSHDASASPL VIVTQLAGVP ILPSILNAVL LTAVLTAANS DVYSSSRILI SLADSGHAPK 360
  361 FLKKTNRFGT PYNAVGVCAA VGFLSFLNLS NNGTVVFNWF LSITSVAGFI AWAIISLCHI 420
  421 RFMKALSLQG IPRTSLPYVA PLQPYLSCDQ CPPRLYEWRG PGTAPPINAT YLMPKNPLLN 480
  481 KQIVPGIFHQ IGFSIKDPAR QDGIEMFGGA LSQMAIRKQL LLLSLASIFI PAVSEASGLN 540
  541 RCPDYVASHA PLVWLHPEDR FMPSDLAAHI SNTIPKLDRQ PISGLSSFDL ENLGDLNGYG 600
  601 GEEVALTSKE DPLTYPTWIL GEAPDAKGQI HNSVPCAVIL VEKSDIDVDA FYFYFYSFNE 660
  661 GPNITQVLEP INRFIAGDHL SSGIHFGNHV GDWEHNMVRF HNGTPVGVYY SQHVDGVGFK 720
  721 WDSSKINITD GRPVVYSAAG SHANYPSRGH QIHNAALFDY CDEGKIWDPV LSAYFYRFNP 780
  781 DTSTITPIIS PLKPSATKPA QNLTSWFDFV GHWGDIRYPD SDPRQKTVPH FGLKRFNSGP 840
  841 NGPRFKHLVR KGLVRDHPRM TGWKEWAVSI FMAWYPCCIR GWRLWRSLGI IAVALSLFVL 900
  901 ALIFGIRKYK TLRQRMAYTK LGGDDIAMNE LGRQEECLVS SDSDSDDEDD YRRDRCEAMM 960
  961 RG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle