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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42547583, gi|...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGHFSAVGE APGAGSYEHG VQVIDEDKEF NTHISEYLQK TNVADSGFNY HLISVFGSQS  60
   61 TGKSTLLNNL FGTEFSVMSE TERRQTTKGI WMSKNKRETS AGTPMSENIL VMDVEGTDGR 120
  121 ERGEDQDFER KSALFALATS EVLIVNIWEH QVGLYQGANM GLLKTVFEVN LQIFLKDKQS 180
  181 TPRSLLFFVI RDHLGTTPLG NLRTTLIQDL TKIWSSLSKP QGLEGSRIED YFDFGFAALP 240
  241 HKILQADKFT EEVQKLGARF TAGHRHGKAG LHGDQELEGG LFLSEYHRRI PADGFSVYAE 300
  301 GIWDQIVNNK DLDLPTQQEL LAQFRCDEIA REVQIDFDVI IAPLEEKQSE ASKLGIPTVL 360
  361 PDLGLAGNDA RQKCIKAFEV QASRYHKGVY TRKRHELEGK IDTRLKSLYQ SQLAAAHKAG 420
  421 VAAFGDAVAN KVKAGQKAGG QYEFAEIVAN EKRKTLDIFG VEAQSLLIEG VTWTNFESQL 480
  481 RLFEKELDEE SAKLRKEEMR RLATRVERWV RSRLGDAIGL EFNKLGSGRG GSGAPENGEK 540
  541 PETEKDLWDR VWKVFTGIVK EAEVRFAERA KSFDATSEEV EIGSWRLRRK SWNALREKIE 600
  601 EEVMEGNILL KLRENFEDKF RYDEAGVPRI WRPTDDIEGI YTKARESTLT LVPLLSRFRL 660
  661 SETYGPPDLP GFVGAQPSGV EASDEEDLAP IGGIDEEDGK SLEEEMTVLS EGKRQDLVVR 720
  721 FKKTADGVYV EAKRGAIGGV AQIPWYFYGL LLALGWNEIL TVLRNPFLCL LILVMAGGTY 780
  781 LAYTLNLLGP MLSMSNAAMT QGVEIAKQQL RDFIANSDTA RQAVGMPARQ DSDNISMDTL 840
  841 DSRGKKANST AEKDDIDDI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle