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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46111275, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKYGTVVDP AMTTNRRSRL SGFRCASTAR VTATLLLSFL AFSPSSASSD FGDRFHDDIV  60
   61 LPPGPVLPSA PEIPEPAEHT FSLRHIYHHG THLHPSLHRK RDVVHEQSRV YLAAEDDFSE 120
  121 YDILRLKAKS RPEPIHRLAD RRPSVVDPMV AESRQRGYAA VLDASAWTMD QVSSPDIKDK 180
  181 DTVLTLALMT ANAYVEHDTD ADWEDVGERW NRSADFGWES DGLRGHVFVD DTNSTIVIGL 240
  241 KGTTTAVFDG EGTTTNDKVN DNLFFSCCCA QQGQWTWHQV CDCATGTYSC NNTCVVQALR 300
  301 EENRYYGAAR ELYSNVTELY PDAQVWLTGH SLGGAVTSML GMTYGLPVVT FEAVPEALPA 360
  361 SRLGLPVPPG ASAEYPQMRE NTGTFHFGHT ADPVYIGTCN GATASCTYGG YAMESTCHAG 420
  421 YECVYDVVAD KGWRVGIGTH RIRSVIDDVI KKYDGVPECK RTPECRDCAQ WKMYESNGTE 480
  481 TTTTSSPSTT STTRTRTRTS TCETPGWWGC LDKTTPVTTT TSTTSSSTST CKTPGWFGCK 540
  541 DKTTSESSTT TTTEASPTTT CETPGRFWGC RDEVEATTTA KPGQVTNVPV TAAPTGTTDD 600
  601 SLSTALPETQ RCLARNWFGI CKEWAIDDLE FATDEM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle