YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15080868
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVIFLHSLT FIIFTVLLIL ILPSYCFIIK DSKIINDTWK YENKENTNKI GSYRKKLRHN  60
   61 VSVNKDIKGN EHIMSSYENE KYIKKLLEDY EKYKITTYSS EYTFFFPGQG EQYMSMGLDT 120
  121 YNNYKECKEL YNDASKILGY NLMDMIKNGP IEKLKNSEVA QPSIYTVSMA SLEKLKIENN 180
  181 DAYMKLNLCM GYSLGEYAAL TCANSLSFDD GVYLTKERGK AMQYCSTLYN MTTVAIVGLT 240
  241 LDNIKKLIED VNHKMNDDIF IVSYMTDRKF GLCGKPESMD YLNTLAKEKY KAIFTKKLEI 300
  301 AGAFHSFYMF PAKETLKNVL NQITFKKLSV PVISNVDGNA YDDPVIIKDL LILQLTSPIK 360
  361 INTCLQNVLK HGYKSGYELG PGTINTNLLR DISKNTKRTI PYI

Type	Start	End	Confidence
Signal Peptide	1	26	0.73
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	403	0.90