YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7537353
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPQPSSINYW WNMGSLLGLC LVIQIVTGIF MAMHYSSNIE LAFSSVEHIM RDVHNGYILR  60
   61 YLHANGASFF FMVMFMHMAK GLYYGSYRSP RVTLWNVGVI IFTLTIATAF LGYCCVYGQM 120
  121 SHWGNMNIAS NMFNMMKTIY MMMLMLLIYI FYTIMMRQMM KTKEYTMLIK SMDYINKNKY 180
  181 MINLNMTNKK DMNNNIGPLN MNILSIIYGS MLGDGHAEKR KGGKGTRIVF QQEYCNINYL 240
  241 YYLHSLLANL GYCNTNLPLI KTRLGKKGKI RQYLKFNTWT YDSFNMIYSE WYIKNMSGKG 300
  301 NIKVMPKSLD NYLTPLALAI WIMDDGCKLG KGLKFTTNCF SYKDVQYLTY LLHNKYNIKS 360
  361 TITKGNKENT QFVIYVWKES MPILTKIVSP YIIPSMKYKL GNYL

Type	Start	End	Confidence
Cytoplasmic	1	8	0.94
Transmembrane Helix	9	33	0.86
Non-Cytoplasmic	34	60	0.88
Transmembrane Helix	61	84	0.82
Cytoplasmic	85	93	0.85
Transmembrane Helix	94	116	0.92
Non-Cytoplasmic	117	135	0.85
Transmembrane Helix	136	155	0.92
Cytoplasmic	156	404	0.93