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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55770563
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPGLSRRRR PDAAALLCCV VAVVAACMVG GALAADAQGA ALLAWKRTLR GGDTALPDWN  60
   61 PADASPCRWT GVRCNANGRV TELSLQQVDL LGGVPDNLSA AMGTTLERLV LAGANLSGPI 120
  121 PAQLGDLPAL THLDLSNNAL TGSIPASLCR PGSKLESLYV NSNHLEGAIP DAIGNLTALR 180
  181 ELIIFDNQLD GAIPASIGQM ASLEVLRGGG NKNLQGALPP EIGNCSKLTM LGLAETSISG 240
  241 PLPATLGQLK NLNTLAIYTA LLSGPIPPEL GRCTSLENIY LYENALSGSI PAQLGGLANL 300
  301 KNLLLWQNNL VGVIPPELGA CTGLAVVDLS MNGLTGHIPA SLGNLSSLQE LQLSVNKVSG 360
  361 PIPAELSRCT NLTDLELDNN QISGAIPAEL GKLTALRMLY LWANQLTGTI PPEIGGCAGL 420
  421 ESLDLSQNAL TGPIPRSLFR LPRLSKLLLI DNTLSGEIPP EIGNCTSLVR FRASGNHLAG 480
  481 DIPPEVGKLG SLSFLDLSTN RLSGAIPPEI AGCRNLTFVD LHGNAIAGVL PPGLFQGTPS 540
  541 LQYLDLSYNA IGGAIPANIG MLGSLTKLVL GGNRLSGQIP PEIGSCSRLQ LLDLSGNSLT 600
  601 GAIPASIGKI PGLEIALNLS CNGLSGAIPK GFAGLARLGV LDVSHNQLTG DLQPLSALQN 660
  661 LVALNISYNN FTGRAPETAF FARLPASDVE GNPGLCLSRC PGDASDRERA ARRAARVATA 720
  721 VLLSALVALL AAAAFVLFGR RRQPLFGRGS TSPADGDGKD ADMLPPWDVT LYQKLEISVG 780
  781 DVARSLTPAN VIGQGWSGAV YRASIPSTGV AIAVKKFRSS DEASVDAFAC EVGVLPRVRH 840
  841 RNIVRLLGWA ANRRTRLLFY DYLPNGTLGG LLHGGGAAIG AAVVEWEVRL SIAVGVAEGL 900
  901 AYLHHDSVPA ILHRDVKSDN ILLGERYEAC LADFGLARVA DDGANSSPPP FAGSYGYIAP 960
  961 EYGCMTKITT KSDVYSFGVV LLEIITGRRP IEAAFGEGQT VVQWVREHLH RKRDPAEVID1020
 1021 SRLQGRSDTQ VQEMLQALGI ALLCASTRPE DRPTMKDVAA LLRGLRHDDS AEAQKAGSGS1080
 1081 AIKWADPRQP GSPTKPMAQA QAHSHTSSLA YSTTGSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle