YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124800689, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFKNKNTL RRKKAFPVFT KILLVSFLVW VLKCSNNCNN GNGSGDSFDF RNKRTLAQKQ  60
   61 HEHHHHHHHQ HQHQHQAPHQ AHHHHHHGEV NHQAPQVHQQ VHGQDQAHHH HHHHHHQLQP 120
  121 QQPQGTVANP PSNEPVVKTQ VFREARPGGG FKAYEEKYES KHYKLKENVV DGKKDCDEKY 180
  181 EAANYAFSEE CPYTVNDYSQ ENGPNIFALR KRFPLGMNDE DEEGKEALAI KDKLPGGLDE 240
  241 YQNQLYGICN ETCTTCGPAA IDYVPADAPN GYAYGGSAHD GSHGNLRGHD NKGSEGYGYE 300
  301 APYNPGFNGA PGSNGMQNYV PPHGAGYSAP YGVPHGAAHG SRYSSFSSVN KYGKHGDEKH 360
  361 HSSKKHEGND GEGEKKKKSK KHKDHDGEKK KSKKHKDNED AESVKSKKHK SHDCEKKKSK 420
  421 KHKDNEDAES VKSKKSVKEK GEKHNGKKPC SKKTNEENKN KEKTNNSKSD GSKAHEKKEN 480
  481 ETKNTAGENK KVDSTSADNK STNAATPGAK DKTQGGKTDK TGASTNAATN KGQCAAEGAT 540
  541 KGATKEASTS KEATKEASTS KEATKEASTS KEATKEASTS KGATKEASTT EGATKGASTT 600
  601 AGSTTGATTG ANAVQSKDET ADKNAANNGE QVMSRGQAQL QEAGKKKKKR GCCG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle