YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8467985, gi|3...
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGYRGGGSA SGGGGGGASS ASAFATRVLL LLTLLPMALA AFAFALQWRG GMRDPAGAAW  60
   61 PAETQRFPGM ENSPLGSSSS SSGGGGGGGS YFAVTSSQSS SAAADCAEIL GRSAASSSHG 120
  121 GISLYRGWGF DSDAGLTPKI CITGSTSAGL HQILPWLYYH KVIGVSHFFL FVEGEAAKPA 180
  181 VTSVLESIRG VKIIYRTKEL KEKQDRSRIW NETWLAGFFY KPCNYELFVK QSLNMEMAII 240
  241 MARDAGMDWI IHLDTDELIH PAGAREYSLR RLLLDVPDNV DMVIFPNYES SIERDDIKDP 300
  301 FTEVSMFKKN YDHLPKDTYF GLYKEATRGN PNYFLTYGNG KSAARVQEHL RPNGAHRWHN 360
  361 YMKTPNEIKL EEAAILHYTY TKFSDLTSRR DRCGCKPTKE DVKRCFILEF DRLVPGTCFM 420
  421 ERQRYQFEAF EEGCVDTHIC PNGKSQSRTS IRSTFISTMK AATHLLNDSS LQAIIRGLKE 480
  481 SGVFTTAVTS AKAHAKFKSS NTDLKNKESI HPNITQGDHL QATVRKILEM VDAQEEAMPP 540
  541 MSPPGFLHQT VETALS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle