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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18144214, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAIIFMINK SIKIKGMSCA ACAARIEKVL GKMNGISKAN VNLATEKLNL EFDENKISFK  60
   61 EIEEKINKLG FSVVRNLKKE SFRVSGMSCA SCAARIEKVL NKLSGIYNAT VNFANESLQV 120
  121 EYDEDEISLK EIKEKVKKLG FELKGNNKST SFKVEGMTCS ACAARIEKVT SKMDGVESSN 180
  181 VNFANSTLNI SFDKDKLSTN DIKAKVEKLG YKLLDASQED EHEKAKENET KRMKNRLIGS 240
  241 AIFTIPLFII SMGHMVGLHL PNIIDPMHNP LNFALIQLLL TTVVIFICRD FFIHGFKNLF 300
  301 MRSPNMDSLI AIGSGAAYVY GLFAIYHIYI GDHSYAMQLY FESAGTILTL ISLGKYLETL 360
  361 TKGKTSDAIK KLMGLAPKTA TLLVDGKEKI VSIDDVKVFD LILVKPGEKL PVDGKVVEGY 420
  421 TSIDESMLTG ESIPAEKKVG DTVFGASINK NGRIIYEATK VGKDTVISQI VKLVEDAQGS 480
  481 KAPIAKLADT ISGYFVPIVI SLAVIASLAW YFSGESKTFA LTIFISVLVI ACPCALGLAT 540
  541 PTAIMVGTGK GAENGILIKS GEALESTQNL NTVVFDKTGT ITEGKPKVTD IICENISKDE 600
  601 LLLLAASAEK GSEHPLGEAI VRDAEEKNLE LKNVLDFEAI PGKGIKCSIE NKSILLGNYK 660
  661 LMKDKNINLK NLLATSEELA SKGKTPMFIA INEKIAGIIA VADTVKETSK KAIETLQKMG 720
  721 LEVVMLTGDN LKTAKAIAKE VGVDRVIAEV LPQEKAEKIK SLQDEGKKVA MVGDGINDAP 780
  781 ALAIADIGMA IGSGTDIAME SADIVLMKGD ILHVVGAIQL SRQTMKNIKE NLFWAFGYNT 840
  841 LGIPVAMGVL HIFGGPLLNP MIGAFAMSFS SVSVLLNALR LKKFKPNYK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle