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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|166211785, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMKKLLIAS LLFGSATVYG ADGFVVNDIH FEGLQRVAVG AALLNMPVRV GDTVSDDDIG  60
   61 KTIRALFATG NFEDVRVLRD GNTLIVQVKE RPTIASITFS GNKAVKEDML KQNLEASGVR 120
  121 VGEALDRTTI SNIEKGLEDF YYSVGKYSAS VKAVVTPLPR NRVDLKLVFT EGVSAKIQQI 180
  181 NIVGNHSFTT DELISRFQLR DEVPWWNVVG DRKYQKQKLA GDLETLRSFY LDRGYARFNI 240
  241 DSTQVSLTPD KKGIYVTINI TEGPQFKLNS VIVSGNLAGH QSEAEKLTKI EPGELFNGSK 300
  301 VTRMEDDIKK MLGRYGYAYP RVVTQPEIND DDKTVKLHIN VDAGNRFYVR HIRFEGNDTS 360
  361 KDSVLRREMR QMEGAWLGND QVEAGKERLN RLGYFETVDV ETQRVPGAAD LVDVTYKVKE 420
  421 RNTGSLNFGI GYGTESGVSF QVGVQQDNWL GTGNTVGING TKNDYQTYAE FTLMDPYFTV 480
  481 DGVSLGGRIF YNDFKADNAD LSGYTNSSYG ADGTLGFPIN ENNSLRVGVG YVHNDLSDML 540
  541 PQVAMWRYLE SVGERPGYDG REGFTTDDFT LNLGWTYNNL DRGFFPTSGV KSSVNTKITV 600
  601 PGSDNEFYKV TFDTSAYQPL NEDRSWVLLG RGRLGYGDGI GSKEMPFYEN FYAGGSSTVR 660
  661 GFRSNNIGPK AAYYANGGAT VTNSTDAVGG NAMAVASIEL ITPTPFISEK YSNSVRTSIF 720
  721 IDSGTVWDTN WENTAKTRAA GIPDYGKASN IRVSAGVALQ WMSPLGPLVF SYAKPVKDYE 780
  781 GDKSEQFQFN IGKTW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle