YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|218927680, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN LATIMTDPEM  60
   61 ADATYIEPIH WEVVRKIIEK ERPDAVLPTM GGQTALNCAL ELERQGVLAE FGVTMIGATA 120
  121 DAIDKAEDRR RFDIAMKKIG LDTARSGIAH NMEEALAVAA DVGFPCIIRP SFTMGGTGGG 180
  181 IAYNREEFEE ICERGLDLSP TKELLIDESL IGWKEYEMEV VRDKNDNCII VCSIENFDAM 240
  241 GIHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFSVNP KNGRLIVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELMNDIT GGRTPASFEP SIDYVVTKIP 360
  361 RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT QQESLQKALR GLEVGATGFD PKVSLDDPEA 420
  421 LTKIRRELKE AGAERIWYIA DAFRAGMSVD GVFNLTNVDR WFLVQIEELV RLEESVAELG 480
  481 INGLTAEFMR HLKRKGFADA RLAKLVGAAE SEVRKLRYKY GLHPVYKRVD TCAAEFSTDT 540
  541 AYMYSTYEEE CESNPTSDRP KVMVLGGGPN RIGQGIEFDY CCVHASLALR EDGYETIMVN 600
  601 CNPETVSTDY DTSDRLYFES VTLEDVLEIV RIEKPQGVIV QYGGQTPLKL ARELEAAGVP 660
  661 IIGTSPDAID RAEDRERFQQ AVNRLGLKQP ANATVATIEQ AVEKATGLGY PLVVRPSYVL 720
  721 GGRAMEIVYD EIDLRRYFQN AVSVSNDAPV LLDRFLDDAV EVDVDAICDG ERVLIGGIME 780
  781 HIEQAGVHSG DSACSLPAYT LSKEIQDVMR QQVEKLAFEL CVRGLMNVQF AVKNNEVYLI 840
  841 EVNPRAARTV PFVSKATGMP LAKIAARVMV GQSLAEQGML EEIIPPYYSV KEVVLPFNKF 900
  901 PGVDPILGPE MRSTGEVMGV GRTFAEAFSK AMLGSQSGMK KSGRALLSVR EGDKHRVVDL 960
  961 AAKLLKQGFE LDATHGTAVV LGEAGINPRL VNKVHEGRPH IQDRIKNGEY TYIVNTTAGR1020
 1021 QAIEDSKLIR RSALQYKVHY DTTLNGGFAT AMALNADPTD QVISVQEMHA KIKNMKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle