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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55742055, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLRSWPGAL HGLALLAFLC HCATAVERHY YIAAVNINWD YTSGQQRTGQ SYKKVVYREY  60
   61 NEGFKQPKAH PLSSGLLGPT LRGQEGDTII VTFRNMADHP CSLHPHGIAY GKQSEGSLYF 120
  121 DNTSLLEKND DVIQPGEEHT YQWDVTSDVT PTAADPPCIT YTYLSHFDIV RDYNTGLIGP 180
  181 MLICKKGTLD DSGNQIHFHQ ESVLLFGVFD ENKSWYSTGD SPQPLNVKYT INGYTNGSVP 240
  241 DLDICAHSKV SWHLLGMSSE PELFSVHFNG QVLLHDGHKT SAVGIISGTA TSASMTGVHP 300
  301 GRWLVSSHIS KHLEAGLHGY LNIRKCDEYT APKRRLTIEQ KKESQEWTYY MAAEEVIWDY 360
  361 APNMPENMDG DFRSKYLKQG PQRIGKKYKK AVFTQYKDGM FKERAEDKQR KRELGILGPV 420
  421 IRAQIRDIIK IVFKNKASRP YSIYPHGLTI DKAAEGASYP QGGNQTYSVQ PGETYTYTWS 480
  481 VTEEDVPTDS DPRCLTRMYH SAVDAPRDIA SGLVGPLLIC KSQSLNKKNV QLKADKEQHA 540
  541 MFTVFDENKS WYQDENINTY CSDPKKVKKD DPEFYKSNVM HTINGYVYES GQELGFCHGE 600
  601 IVTWHVSSVG EQDYIQTATF YGHTFELKNR EEDILSLFPM TGETITMNMV NIGIWLLASL 660
  661 NSHDSTKGMR VKFKDLECFR DYVIEYDYED GKFTAWKPPT INEIKKEEPV RARPDVVDEY 720
  721 SDLFAETLNL RTFNNVKDEV EIIDLTFLDQ DDGLLPIVEE KSLGSSNENL HNATLQSFIE 780
  781 THGLLMEEGD LDKGESSNKV LNDSTDKALL ETTTTFDSNR VVALNNETDS IILDFPIVER 840
  841 KVRSAPSKPM NEPESVTMNF KTTEHINSSL ERINAIYSPI TETNINTMTE THTDFSITPF 900
  901 DGSTGEMNFT LEDDTALLNS SESEPLQSNQ NSENRIAFQE ELNAKDGTDV DSNNSVKNQI 960
  961 FKYNVPSGDT LSNSSKIQVE EDFVLLDSSY FSEMSTTMEY DVSQKDTVKG ESKETAQSQE1020
 1021 LSSTKKTYSG EIILESLPDI TSAFNLNSSS VLRNNSLESN ESSNETLFMS SNATFSDSTN1080
 1081 ATSSDSSTAT FADFSNTTFS NATFSDFSNR ISQMSDSSNA TLSDSSNATL SDSSNATLSD1140
 1141 SSNATLSDSS NATLSNSSNA TFSDSSNKTF SDSSNATLFG VSYSSNTTLS DFSLESEMTE1200
 1201 YILSSANDTI KSHSEVVSNT SQLSSSESTE NISLLYGSLN ASSMKNDSES ESEEEVVIYL1260
 1261 NKNHSEAILT SHLDQKEEHW GYESKHELVH KELPDHMNKY VKDKSAANSN KPKIEKEKKK1320
 1321 VYQRVKPKKG YGMKTKKSKD YKPQPRSSFS PRGFGPSVLT PRGSRPVSSE DELTEKPIVI1380
 1381 GVPRRDFNDY ELYIPKQDQE ADFDGLLDHP EEYEYVEYKD PYSKTADVQA LDATSQHLLK1440
 1441 MAGDKNTRTY FISVEEEEWD YAGYGQRRLD KTAQNERPTV FRKVVFRRYL DSTFSIRDIR1500
 1501 GEMDEHLGIL GPLIKAEVDQ TVMVFFRNRA SRPYSLHANG VKYLKQMEGL SYDDESPYWY1560
 1561 KQDDAVPPNG TFTYMWTINP KSGPQNNESD CRTWTYYSAV NPERDINSGL IGPLLVCRKG1620
 1621 TLDKKPEDRR EFVLLFMTFD ENKSWLYEEN RQRIERKNRR VVMDPNFQDN LKFDAINGII1680
 1681 YSLKGLRMYT NQLAKWHLIN MGSPKDLHSV HFHGQTFINK ELKDHRQGVY PLLPGGFATL1740
 1741 EMLPSKPGLW QLESEVGLSQ QRGMQTLFLF DESYKKYRVC QVLRSYLIYF AVCDHPLGLI1800
 1801 SGTVQDEQIT ASDTRGQWYP HLARLHNTGK YNAWSTSSEP GQYLQVDFQR PVVISKVATQ1860
 1861 GAKQFLTHNF VLNYTISYST DKKKWIYYKG DSDAVRKANI HKTNVFFNAR QTFEGNAEAY1920
 1921 ETKENIFFPP LIGRYVRLHP LHSYNFPTVR LEYYGCELDG CSVPLGMEKG LIDDSKITAS1980
 1981 SVASNWYSGQ WHPWYARLNK QGTANAWQAK NNDIQPWIQV ELKEVKKITG IVTQGAKSMG2040
 2041 NEMFVRSYIL EYSEDGRRWM KYTDDDDYEQ KLFQGNTDNN GQIKNYIYPP IFSRFIRIIP2100
 2101 KQWQKSVTMR IELLGCDFE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle