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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55741884, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPIKKDAKS NPSASANLFS QIFFCWLNPL FSIGSKRRLE EDDMFNVLPE DRSKKLGEEL  60
   61 QSYWDQEKEK AAKELKTPKL TKAIIRCYWK SYAVLGVFTL IEESIKVIQP VFLGKLIKYF 120
  121 ENYRHDDMAA LSEAYGYATG VCLSTLGLAL LHHLYFYHVQ RAGMKIRIAM CHMIYRKALC 180
  181 LSAAAMGQTT TGQIVNLLSN DVNKFDELTI FLHFLWVGPL QAAAVIGLLW QEIGPSCLAG 240
  241 MAVLVFLMPL QTMFGKLFSK YRSKTAALTD SRIRTMNEVV SGIRIIKMYA WEKPFAMLVN 300
  301 DVRRKEISKI MSSSYLRGLN MASFFTANKI ILFVTFTVYV LVGNTMSASR VFVAVSLYSA 360
  361 VRLTVTLFFP AAIEKVSESA ISIRRIKKFL LLDELVKNHL PLSQEEKKEP SVEMQDLICY 420
  421 WDKTLDAPTL QNVCFTVKPG QLLAVIGPVG AGKSSLLSTV LGELPAEKGV IKVKGELTYA 480
  481 SQQPWVFPGT IRSNILFGKE LQPQRYERVL RACALKRDME LLPDGDLTVI GDRGATLSGG 540
  541 QKARVNLARA VYQDADIYLL DDPLSAVDAE VSRHLFEQCV CGILKDKPRI LVTHQLQYLK 600
  601 AANQILVLKE GHMVARGSYS ELQQSGLDFT SLLKKDEEEE SGSEKGEAPR SPRSRTVSQN 660
  661 SVRSHSSSVL SVKDDSDQLP AEPVHTMAEE SRSEGNIGIR MYWKYFRAGA NVVMLVLLVL 720
  721 LNLLAQTFYI LQDWWLSYWA TEQEKLDHNT NNTNTNNTSA GNTTQQLDLN FYLGIYAGLT 780
  781 GATIVFGFMR CLIMFNALVS SAETLHNRMF NSILRTPVRF FDINPIGRIL NRFSKDIGHL 840
  841 DSLLPWTFVD FIQVFLQIVG VIAVASSVIP WILIPVLPLL ICFLFLRRYF LRTSRDVKRI 900
  901 ESTTRSPVFS HLSSSLQGLW TIRAFKAEER FQQTFDAHQD LHSEAWFLFL TTSRWFAVRL 960
  961 DGMCSVFVTI TAFGCLLLKD TMNAGDVGLA LSYAVTLMGM FQWGVRQSAE VENMMTSVER1020
 1021 VVEYTELESE APWETQKRPS PDWPNRGLIT FDRVNFSYSS DGPVVLKNIS AMFRPREKVG1080
 1081 IVGRTGAGKS SLISALFRLS EPEGKILVDG VLTSEIGLHD LRQKMSIIPQ DPVLFTGTMR1140
 1141 KNLDPFNQHS DHDLWKALEE VQLKAAVEEL PGKLETELAE SGSNFSVGQR QLVCLARAIL1200
 1201 RKNRVLIIDE ATANVDPRTD ELIQKTIRDK FKECTVLTIA HRLNTIIDSD RILVLDAGRI1260
 1261 HEYDAPHVLL QNQSGIFYKM VQQTGKAEAT SLLQTAKQAY TNRSPAHQLN GFATTGDGSL1320
 1321 IIFETAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle