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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55249749, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFSRLHTYT PPQCVPENTG YTYALSSSYS SDALDFETEH RLEPVFDSPR MSRRSLRLIT  60
   61 TTAAYSSGDG QTVDTHISTS RATPAKGRET RTVKQRSASK PAFSINHLSG KGLSSSTSHD 120
  121 SSCSLRSATV LRHPVLDESL IREQTKVDHF WGLDDDGDLK GGNKAATQGN GELAAEVASS 180
  181 NGYTCRDCRM LSARTDALTA HSAVHGPTSR VYSRDRTLRP RKAASGTFWW LGSGWYQFVT 240
  241 LISWLNVFLL TRCLRNICKV FVLLLPLLLL LGAGFSLWGQ GNFFSLLPML NWTAMQPAQR 300
  301 VDNPKDMHRP GPLSPSPPLK VDPMASQWPQ ESDMGQKIAS LSAQCHNHDE RLAELTVLLQ 360
  361 KLQIRVDQVD DGREGLSLWV KDMVGQHLQE IGSIEPPDAK TDFLTLHHDH EVRLSSLEDV 420
  421 LRKLTEKSEA IQKELEETKL RAGSRDEEQP LLDRVQHLEL ELNLLKSQLS DWQHLRSSCE 480
  481 QADARIQETV QLMFSEDQPG GSLEWLLQKL SSRFVSKDEL QVLLHDLELK LLQNITHHIT 540
  541 VTGQAPTSEA IVSAMSQAGI SGITEAQAHI IVNNALRLYS QDKTGMVDFA LESGGGSILS 600
  601 TRCSETYETK TALLSLFGVP LWYFSQSPRV VIQPDIYPGN CWAFKGSQGY LVVRLSMKIY 660
  661 PTTFTMEHIP KTLSPTGNIS SAPRDFAVYG LETEYQEEGQ PLGRFTYDQE GDSLQMFHTL 720
  721 ERPDQGFQIV ELRVLSNWGH PEYTCLYRFR VHGEPIQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle