YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ONCM_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAQPPPRTL LSLALALLFL SMSWAKRGCS SSSPKLLSQL KSQANITGNT ASLLEPYILH  60
   61 QNLNTLTLRA ACTEHPVAFP SEDMLRQLSK PDFLSTVHAT LGRVWHQLGA FRQQFPKIQD 120
  121 FPELERARQN IQGIRNNVYC MARLLHPPLE IPEPTQADSG TSRPTTTAPG IFQIKIDSCR 180
  181 FLWGYHRFMG SVGRVFEEWG DGSRRSRRHS PLWAWLKGDH RIRPSRSSQS AMLRSLVPR

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	239	0.99