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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|197251117, gi...
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKITLYATT VITVGLLCYL GLSGYVWYYD KQRSKKSDVQ ASVVGENNKI LGYFREKGCD  60
   61 YCHTPSAELP FYSSFPVAKQ LMDYDIQLGY KSFNLEAVRA ALIADTPVPQ SELNKIEWVM 120
  121 QHQTMPPTRY VALHWAGGVS DKERTDILNW IADQRERNYA SADTDPAHRN EPVQPIPRNI 180
  181 PVDAKKVDLG FRLYHDERLS GDSTISCAHC HALNAGGVDG RKTSIGVGGA VGPINAPTVF 240
  241 NSVFNIEQFW DGRAATLQEQ AGGPPLNPIE MASKSWDEII SKLDKDPVLK KDFQAVYPQG 300
  301 FTGENITDAI AEFEKTLITP DSAFDKWLRG DENALTAQQK HGYQLFKENK CATCHGGIIL 360
  361 GGRSFEPLGL KRDFNFGEIT AADIGRMNVT KEVRDKLRQK VPGLRNVALT APYFHRGDVP 420
  421 TLDGAVKLML RYQVGTDLPQ NDIDDIVAFL ESLTGVYTPY QPEYAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle